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Name : Weevi_0720 (Weevi_0720) Accession : YP_004238013.1 Strain : Weeksella virosa DSM 16922 Genome accession: NC_015144 Putative virulence/resistance : Unknown Product : DNA-directed RNA polymerase subunit beta Function : - COG functional category : K : Transcription COG ID : COG0085 EC number : - Position : 744473 - 748309 bp Length : 3837 bp Strand : - Note : COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; HAMAP: DNA-directed RNA polymerase subunit beta, bacterial-type; InterProIPR007644:IPR007642:IPR007645:IPR019462:IPR 007120:IPR007641:IPR010243; KEGG: zpr:ZPR_1168 DNA-directed RNA pol DNA sequence : TTGGCTACAACAACAAACAACCCAGCTGTAAAAAACGAAAGATTGAGTTTCGCATCTACCAAAGCAGTTGCTCAGTTTCC AGATTTCTTAGACATTCAAATCAAATCTTTCGAAGATTTTTTCCAGTTAGAAACAAGACCAGACCAACGCAATAATGAAG GTCTTTTCAAAACTTTTGCAGAGAACTTTCCAATTACAGATACTCGCAATCAGTTTGTTTTAGAATTCTTGGACTACTTT GTAGATCCACCACGTTATTCTATCGATGAGTGTATCGAGCGAGGACTAACGTACAGCGTGCCGCTAAAAGCACGTCTAAA ACTATATTGTACCGACGAAGAACACGAAGATTTCGAAACAGTCGTACAAGATGTGTACTTAGGTACAATCCCCTACATGA CCCCATCGGGATCGTTTATAATTAATGGAGCAGAACGTGTTATAGTATCACAACTACATCGTTCACCAGGTGTTTTCTTC GGACAATCTTTCCATGCCAATGGGACAAAATTATATTCTTCTAGAATTATCCCATTCAAAGGTTCGTGGATAGAATTTGC AACAGATATTAATAGCGTAATGTATGCCTATATTGATCGTAAGAAAAAATTACCACTTACGACTTTATTAAGAGCTATAG GTTACGAGAGAGATAAAGATATTTTAGAAATTTTCGATTTAGCAGAAGAAGTAAAAGTTACCAAAGCTAATCTGAAAAAA ATTTTAGGACGCAAACTAGCTGCTCGTGTATTGAATACTTGGCACGAAGATTTCGTAGACGAAGATACTGGTGAAGTAGT ATCTATCGAGCGTAATGAAATCATTCTAGACCGAGAAACCATCATCGAAAAAGATCATATTGATCAAATCGTAGACTCTG GAGTGAAAACAATTCTTCTACACAAAGAAGACAATAATTCTGCAGACTATGGTATTATACACAATACCCTACAAAAAGAT CCAACCAATACCGAAAAAGAAGCGGTAGAATATATCTATAGACAATTACGTAACGCAGAGCCACCAGATGAAGAAACCGC ACGCGGAATTATTGATAAATTATTCTTCTCTGATCAACGTTACTCATTAGGAGAAGTAGGACGTTACCGTTTAAATAAAA AATTAGGGCTTAACATTTCAGAAGATATCGAAGTGTTAACCAAAGATGATATAATTTCGATTATTAAATACTTAATCGAA TTAATTAATTCTAAAGCAGAAGTAGACGACATAGATCACCTTTCTAACCGTCGCGTACGTACAGTTGGAGAGCAAATGGC CGCTCAGTTTGGCGTTGGTCTTGCTCGTATGGCAAGAACAATCCGAGAGAGAATGAATGTCCGAGATAATGAAGTGTTTA CGCCAATAGACTTGATTAATGCAAAAACTTTATCATCCGTCATTAACTCATTCTTCGGAACCAATCAGTTGTCTCAGTTC ATGGATCAAACAAATCCATTATCAGAGATTACCCACAAACGTCGTCTTTCGGCACTAGGACCAGGTGGTCTTTCGAGAGA ACGAGCAGGTTTTGAGGTGCGTGACGTACATCACACGCACTACGGACGACTGTGTCCGATTGAAACCCCAGAGGGACCAA ATATTGGATTGATTTCTTCTCTTTGTGTATTTGCGAAAGTTAATAATTTAGGTTTTATCGAAACGCCGTATCGAGAAGTA GAGAAAGGTAAAGTAAACTTAGAGAAAGATCCTATTTATCTATCTGCAGAAGAAGAAGAAGGAAAAATCATTACTCAGGC GAATATCGAAATGGGAGAGGATGGAACGATACAAACCGAGCGTGTTGTTGCTCGCGAAGATGGAGATTTCCCTGTAGTAG AACCACATGAAGTTGATTTAATGGACGTTGCTCCAAATCAGATAGCTTCTATTTCTGCATCCTTAATCCCATTCCTTGAG CATGATGATGCAAACCGTGCATTGATGGGATCGAACATGATGCGTCAGGCAGTTCCGTTATTAAAACCACAAGCCCCAAT TGTAGGGACAGGTTTAGAAAAACAAGTTGCCAAAGACTCTCGAATTTTGGTCAACGCAGAACGAGAAGGAACTGTTACTT ACGTAGATGCCAATAAGATTATCATTGCATACGATCGTACCGAAAATGAAGAATTAGTAAGTTTCGATTCGAATGAAAAG ACCTATTCTTTGACCAAATTCCGTAAAACGAATCAAGGAACAACCATCTGCCTGAAACCAATTGTAAAAGTTGGAGATCG AGTAGATAAAGGGCAAGTATTGTGTGAAGGTTATGCAACCGAAGGTGGAGAACTGGCAATAGGACGTAATATGGTTGTAG CCTTTATGCCATGGCAAGGATATAATTTCGAGGACGCGATTGTGATCTCTGAAAAAGCAGTACGCGAAGATTGGTTTACC TCAATCCATATTGATGAATACTCGCTAGATGTTCGAGATACCAAGTTGGGAATGGAAGAGCTAACAGCTGATATACCTAA TGTATCAGAAGAAGCAACCAAAGATTTAGATGAAAATGGTATGATTCGTATCGGTGCCGAAGTGAAACCAGGCGATATCT TAATCGGCAAGATTACTCCTAAAGGAGAATCCGATCCTACCCCTGAAGAAAAATTATTACGTGCAATCTTTGGAGACAAA GCAGGTGACGTAAAAGATGCTTCATTAAAAGCTTCTCCATCACTTCGGGGTGTTGTAATCGATAAGAAATTATTCTCACG ATCGATTAAAGATAAACGAAAAAGATCACAAGATAAAGCCATTATCGAAAGCATAGAAAACGAATTTGAAGTTAAGTTTA ATGAACTACGCAACGTACTTTTAGAAAAACTATATATCCTTTTAAATGGAAAAACTTCACAGGGAGTTTACAATGATCTT AAAGAAGAAGTCATCAAAAAAGGCGTAAAATATACCCAAAAGATGCTTCAAAATGTTGAAGATTACCTAAACTTGAATGG AAGTGAAACAGTTTGGACTACCGATGAAGATAAAAACGAGTTGGTAAAAGAATTATTGCATAACTACAAAATCAAACATA ATGATTTGCAAGGTGCCTTAAACCGAGAACGCTTTACCATTGCTGTAGGGGATGAATTACCAGCAGGAATTGTAAAATTA GCCAAAATCTATATTGCGAAAAAACGTAAGTTACGCGTAGGAGATAAAATGGCCGGTAGACATGGTAACAAAGGTATCGT GGCAAGAATTGTACGAGATGAAGACATGCCTTTCTTAGAAGATGGAACCGCAGTAGATATTGTCCTAAACCCATTAGGAG TACCATCTCGTATGAATATTGGACAGATTTATGAAACAGTTCTAGGATGGGCTGGTATGAAATTAGGTAAGAAATTTGCT ACCCCTATTTTCGACGGTGCGGAAATCGAAGATATTGATAATATTACCGATGAAGCAGGTATCCCTAAACACGGTACAAC ATACCTATACGACGGGAATACAGGAGAACGTTTCGCTCAAAAAGCAACAGTAGGAGTAATCTATATGTTGAAGCTTGGGC ACATGGTCGATGACAAAATGCACGCACGTTCTATTGGTCCATACTCGTTGATTACACAACAACCATTAGGAGGAAAAGCA CAATTCGGTGGACAACGTTTCGGAGAAATGGAGGTTTGGGCACTAGAAGCTTTTGGTGCTGCGAATATCCTACGTGAGAT TTTAACAGTTAAATCTGATGACGTAGTAGGTAGAGCTAAAACTTACGAAGCAATCGTAAAAGGAGAACCAATGCCAGAAC CTGGTATACCAGAATCATTCAACGTATTGTTGCATGAGTTACAAGGTCTTGGATTAGACATCAATTTGGAAGATTAA Protein sequence : MATTTNNPAVKNERLSFASTKAVAQFPDFLDIQIKSFEDFFQLETRPDQRNNEGLFKTFAENFPITDTRNQFVLEFLDYF VDPPRYSIDECIERGLTYSVPLKARLKLYCTDEEHEDFETVVQDVYLGTIPYMTPSGSFIINGAERVIVSQLHRSPGVFF GQSFHANGTKLYSSRIIPFKGSWIEFATDINSVMYAYIDRKKKLPLTTLLRAIGYERDKDILEIFDLAEEVKVTKANLKK ILGRKLAARVLNTWHEDFVDEDTGEVVSIERNEIILDRETIIEKDHIDQIVDSGVKTILLHKEDNNSADYGIIHNTLQKD PTNTEKEAVEYIYRQLRNAEPPDEETARGIIDKLFFSDQRYSLGEVGRYRLNKKLGLNISEDIEVLTKDDIISIIKYLIE LINSKAEVDDIDHLSNRRVRTVGEQMAAQFGVGLARMARTIRERMNVRDNEVFTPIDLINAKTLSSVINSFFGTNQLSQF MDQTNPLSEITHKRRLSALGPGGLSRERAGFEVRDVHHTHYGRLCPIETPEGPNIGLISSLCVFAKVNNLGFIETPYREV EKGKVNLEKDPIYLSAEEEEGKIITQANIEMGEDGTIQTERVVAREDGDFPVVEPHEVDLMDVAPNQIASISASLIPFLE HDDANRALMGSNMMRQAVPLLKPQAPIVGTGLEKQVAKDSRILVNAEREGTVTYVDANKIIIAYDRTENEELVSFDSNEK TYSLTKFRKTNQGTTICLKPIVKVGDRVDKGQVLCEGYATEGGELAIGRNMVVAFMPWQGYNFEDAIVISEKAVREDWFT SIHIDEYSLDVRDTKLGMEELTADIPNVSEEATKDLDENGMIRIGAEVKPGDILIGKITPKGESDPTPEEKLLRAIFGDK AGDVKDASLKASPSLRGVVIDKKLFSRSIKDKRKRSQDKAIIESIENEFEVKFNELRNVLLEKLYILLNGKTSQGVYNDL KEEVIKKGVKYTQKMLQNVEDYLNLNGSETVWTTDEDKNELVKELLHNYKIKHNDLQGALNRERFTIAVGDELPAGIVKL AKIYIAKKRKLRVGDKMAGRHGNKGIVARIVRDEDMPFLEDGTAVDIVLNPLGVPSRMNIGQIYETVLGWAGMKLGKKFA TPIFDGAEIEDIDNITDEAGIPKHGTTYLYDGNTGERFAQKATVGVIYMLKLGHMVDDKMHARSIGPYSLITQQPLGGKA QFGGQRFGEMEVWALEAFGAANILREILTVKSDDVVGRAKTYEAIVKGEPMPEPGIPESFNVLLHELQGLGLDINLED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 46 |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Weevi_0720 | YP_004238013.1 | DNA-directed RNA polymerase subunit beta | NC_011035.1.6448762. | Protein | 0.0 | 46 |
| Weevi_0720 | YP_004238013.1 | DNA-directed RNA polymerase subunit beta | NC_009085.4918494.p0 | Protein | 0.0 | 46 |
| Weevi_0720 | YP_004238013.1 | DNA-directed RNA polymerase subunit beta | NC_010400.5987325.p0 | Protein | 0.0 | 46 |
| Weevi_0720 | YP_004238013.1 | DNA-directed RNA polymerase subunit beta | NC_010611.6233925.p0 | Protein | 0.0 | 46 |
| Weevi_0720 | YP_004238013.1 | DNA-directed RNA polymerase subunit beta | NC_011595.7060572.p0 | Protein | 0.0 | 46 |
| Weevi_0720 | YP_004238013.1 | DNA-directed RNA polymerase subunit beta | NC_010410.6003841.p0 | Protein | 0.0 | 46 |
| Weevi_0720 | YP_004238013.1 | DNA-directed RNA polymerase subunit beta | NC_011586.7046027.p0 | Protein | 0.0 | 46 |
| Weevi_0720 | YP_004238013.1 | DNA-directed RNA polymerase subunit beta | NC_008702.1.4609796. | Protein | 0.0 | 46 |
| Weevi_0720 | YP_004238013.1 | DNA-directed RNA polymerase subunit beta | NC_002516.2.881699.p | Protein | 0.0 | 45 |
| Weevi_0720 | YP_004238013.1 | DNA-directed RNA polymerase subunit beta | CP004022.1.gene2794. | Protein | 0.0 | 45 |
| Weevi_0720 | YP_004238013.1 | DNA-directed RNA polymerase subunit beta | NC_002695.1.914942.p | Protein | 0.0 | 45 |
| Weevi_0720 | YP_004238013.1 | DNA-directed RNA polymerase subunit beta | CP000034.1.gene3741. | Protein | 0.0 | 45 |
| Weevi_0720 | YP_004238013.1 | DNA-directed RNA polymerase subunit beta | CP001918.1.gene250.p | Protein | 0.0 | 45 |
| Weevi_0720 | YP_004238013.1 | DNA-directed RNA polymerase subunit beta | CP001138.1.gene4362. | Protein | 0.0 | 45 |
| Weevi_0720 | YP_004238013.1 | DNA-directed RNA polymerase subunit beta | CP000647.1.gene4402. | Protein | 0.0 | 45 |
| Weevi_0720 | YP_004238013.1 | DNA-directed RNA polymerase subunit beta | CP002695.1.gene18.p0 | Protein | 0.0 | 45 |
| Weevi_0720 | YP_004238013.1 | DNA-directed RNA polymerase subunit beta | CP000675.2.gene392.p | Protein | 0.0 | 44 |
