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Name : SpiBuddy_2857 (SpiBuddy_2857) Accession : YP_004248859.1 Strain : Sphaerochaeta globosa Buddy Genome accession: NC_015152 Putative virulence/resistance : Unknown Product : DNA-directed RNA polymerase subunit beta Function : - COG functional category : K : Transcription COG ID : COG0085 EC number : - Position : 3085230 - 3088748 bp Length : 3519 bp Strand : - Note : TIGRFAM: DNA-directed RNA polymerase subunit beta, bacterial-type; HAMAP: DNA-directed RNA polymerase subunit beta, bacterial-type; KEGG: ssm:Spirs_0949 DNA-directed RNA polymerase, beta subunit; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA DNA sequence : ATGGTTGCCAAAGGCAAATCCATAACACGCACGTACATCGGTTCTGAATTACATGAAGTCTGTGAACTGCCCAACCTTAT CGGGATCCAGCTTGATTCCTATGAGAGATTTTTGCAGCTTGAACGTTGCAAGCAGGGATTAGGTCCGGATTCGTCGTACG GGCTTGAGGAAGTGTTCCAGTCGACATTCCCCATTGACAGCCCCAATGGTGAGATGCGTCTCGCTTATAAGGGGTATACG ATTGACCTTGATAATATCAAGTTCTCCGAAACGGAGTGCAAGAAGAAAGGTCGATCCTTTAGTGTGCCCATCAAAGTCAC GATCAGCCTTGAGTTCTCCAATGGAGAAATGAGGGAGAAAGAGATTTTCTTTGGTGATATTCCGCTGATGACCGACCGTG GTACCTTTATTATTAATGGTGCCGAGCGCGTTGTGGTCAGTCAGATTCACCGCTCCCCCGGTGTCATTTTTTCGAATGAG AAAGATGTCTACTCCTCCAGGATTATTCCCTATCGGGGTTCTTGGTTGGAGTTTGAGATTGATGATAAAAAGCATTTGAT CTTCACCAAGATTGACCGAAAGAAGCGTATTCTAGGTACGCTCTTTCTGCGTGCAATCGGGTTTGACACCCGTGAGAAGA TTCTTGAGCAGTTTTACAGTTCCGAAACAGTAGAGCTTGCAGATGATTCAGACTTGAAGTCAAACTTGGAAAACAGGTAT CTCTTCAAGGATGTCTATGCACAGGTCGAAAAAACCGAGAAGAAGGTTTTGCGCGCCGGTGACATGCTGCATGCCCACGA AATCGACGAGTTGCTCAAGCTCAATGTTCATGAGGTGCAATTAGTCAACCTCCGTGGTGAAGGAACCCTGCACAGTGACA TGATTCTCAATTGTTTCGAGATTGAGGATGCCAAGTATACTCGTGAAGGCTGCGATGAACCTACCAAGGAAGACGTACTT TCCCCGATTTTCTCAGTCTTGATGCCTGGTGAGATGATTGCCATCGAGCGTGCAGAGAAGGACCTTCCTGATATGTTCTT CTCCAACCGCCGCTATGATCTCGGTTCTGTAGGACGTTACAAGTTCAATAAGAAGTTTGGAACCGGCACTGAAGAGGAAG AGGAGAATGCTTCCACCGATTTGACCGTTCTCACCCCGCAGGATATCGTCAATACGATGGATTTCCTGATCAAGGTGTTT ATCCGTGAACATAACGTCGATGATATTGACCACTTGGGCAACAGGCGTGTCCGCTCGGTCGGTGAGCTTTTGCAGAATGC GCTGAAGAGTGCTTTCGCCCGCATGGAGCGCATCGCCAAGGAGCGAATGAACCTGGAGACCGGTTCGGTCAAACCGCAGG ACCTGATTTCGATCAAGCCGATTGTGGCAGCCATCAAGGAATTCTTCGGAAGCAGCCAGCTTTCGCAGTTCATGGACCAG GTCAATCCGCTTGCTGAGCTTACTCATAAGAGAAGGCTCAATGCACTCGGTCCCGGTGGTCTATCACGTGATCGTGCGGG CTTTGAGGTTCGTGACGTTCACTACACCCACTATGGTCGTATCTGTCCCATCGAGACTCCTGAAGGACCAAACATCGGTC TGATTGTCTCGTTGGCAAACTATACCCGCATCAACCAGCATGGCTTCTTGGAAACCCCCTATCGCAAGGTAGTAAACGGT GTGGTGTCCAAGCAGTATCGCTATTTGGATGCAAACGATGAAGAGAAATTCTTCATCGCCCAGGCTTCGGCAAAGCTGGA TACTGATGGAAACTTCCAGGAAAAAGAAGTTCCGGTGCGCAGAAGTGGTGATTACTCCACCAAGCCGCCTGTCGAAATCA AGTACATGGACGTTGACCCGAAGCAGGTAATCAGCGTTGCAGCCTCCTTGATTCCATTCCTCGAGCACGACGACGCCAAC CGCGCCCTGATGGGTTCGAACATGCAGCGTCAGGCAGTTCCCCTTGTATTCCCCGAAACCCCGCGCGTGGGTACCGGCAT GGAAGCAAAGACTGCTTATGACAGCGGTGTATTGGTGAAGGCAAAGCGCAGTGGAACGATTACCTACGTCAGTTCGGACC GTGTAGTGATCCAGCCTGATTCGGCGCAGATCCAGGGTCAGTTGGATACCTATGAGATTCAGAAGTACCAGAGGACAAAC CAAGATACTTGTTTCAATCAGAAGCCGATTGTTTCTTTCGGCCAACATGTTGAAGCCGGTGCTGTTCTTGCCGATGGACC TGCAACGCAGAGTGCGGAGTTGGCCCTCGGTCGTAACATTCTTGTCGGATTTGTTCCTTGGAACGGGTACAACTATGAGG ACGCCGTCCTTATTAGTGAACGGGTAGTCAAGGACGATATTTTCACTTCTGTGCATATCAAGGAGTTCACCACCGATATC CGCGAGACCAAGCTCGGTCCTGAGAAGCTGACCAGGGATATTCCCAACACCAGCGAAAAAATGCTCGAGCAGCTCGACGA GGATGGTATTGTACGTATTGGAACCGCAGTCCGTCCGGGCTCGATTCTGGTAGGCAAGGTAACACCCAAGAGTGAAAGCG ATACTACTCCTGAGTTCAAGTTGCTCAACTCGATATTCGGTGAGAAGGCCAAGGAAGTCCGTGACACCTCCCTGAAGGTT CCCCATGGAACCGAGGGTACCGTCATTGACATTCAGCGGTTGAAGCGAAGCAATAATGATGAGCTTCCCCCGGGTGTCGA GGAGACGGTGAAGGTCCTCATTGCCACCAAGCGCAAGCTGAGGCAGGGTGACAAGATGGCAGGACGACACGGTAACAAGG GTGTTGTAAGCCGAATTCTTGCCGAGGAAGACATGCCTTATATGGCCGATGGCACGCCTCTGGATGTCTGTTTGAACCCG TTGGGTGTTCCTAGCCGAATGAACATCGGACAGCTGATGGAGACCCAGCTCGGTTGGGCTGCTGTGAAACTGGACAAGTG GTATTCCACTCCGGTATTCCAGAGTGCTTCCATGGCTCAGATTGAAGAGAAAATGCGCGAGGCAGGTTTGCCTGAGAACT CCAAGACTGTTCTCTATAATGGTCTTACGGGTGTCCCCTTCGTGAATCCTGTATTCTGCGGATATATCTACTATTTGAAG TTGCACCACCTGGTCGATGACAAGATGCATGCCCGTTCAACCGGTCCCTATTCACTGGTAACCCAGCAGCCGCTTGGCGG TAAGGCTCAGTTCGGTGGTCAGAGACTTGGAGAGATGGAAGTATGGGCACTTGAGGCGTATGGCGCTGCCAACACGCTGC AGGAGCTTTTGACCATCAAGAGTGACGACATGAACGGACGTGTCAAGATTTATGAGAGTATCGTCAAGGGAGAACCGGCC ACTACTGCAGGAATGCCCGAGGCATTCAATGTATTGGTTCAGGAGATCCGTGGCTTGGCTCTGGATATGTCTGTGTATGA CTCCAAGGGTCGGCAAGTGCCACTTACTGAACGAGATGAAGAGTTGATCGCCAAGCAGTCGAAAGGCTCCCTCAACTAA Protein sequence : MVAKGKSITRTYIGSELHEVCELPNLIGIQLDSYERFLQLERCKQGLGPDSSYGLEEVFQSTFPIDSPNGEMRLAYKGYT IDLDNIKFSETECKKKGRSFSVPIKVTISLEFSNGEMREKEIFFGDIPLMTDRGTFIINGAERVVVSQIHRSPGVIFSNE KDVYSSRIIPYRGSWLEFEIDDKKHLIFTKIDRKKRILGTLFLRAIGFDTREKILEQFYSSETVELADDSDLKSNLENRY LFKDVYAQVEKTEKKVLRAGDMLHAHEIDELLKLNVHEVQLVNLRGEGTLHSDMILNCFEIEDAKYTREGCDEPTKEDVL SPIFSVLMPGEMIAIERAEKDLPDMFFSNRRYDLGSVGRYKFNKKFGTGTEEEEENASTDLTVLTPQDIVNTMDFLIKVF IREHNVDDIDHLGNRRVRSVGELLQNALKSAFARMERIAKERMNLETGSVKPQDLISIKPIVAAIKEFFGSSQLSQFMDQ VNPLAELTHKRRLNALGPGGLSRDRAGFEVRDVHYTHYGRICPIETPEGPNIGLIVSLANYTRINQHGFLETPYRKVVNG VVSKQYRYLDANDEEKFFIAQASAKLDTDGNFQEKEVPVRRSGDYSTKPPVEIKYMDVDPKQVISVAASLIPFLEHDDAN RALMGSNMQRQAVPLVFPETPRVGTGMEAKTAYDSGVLVKAKRSGTITYVSSDRVVIQPDSAQIQGQLDTYEIQKYQRTN QDTCFNQKPIVSFGQHVEAGAVLADGPATQSAELALGRNILVGFVPWNGYNYEDAVLISERVVKDDIFTSVHIKEFTTDI RETKLGPEKLTRDIPNTSEKMLEQLDEDGIVRIGTAVRPGSILVGKVTPKSESDTTPEFKLLNSIFGEKAKEVRDTSLKV PHGTEGTVIDIQRLKRSNNDELPPGVEETVKVLIATKRKLRQGDKMAGRHGNKGVVSRILAEEDMPYMADGTPLDVCLNP LGVPSRMNIGQLMETQLGWAAVKLDKWYSTPVFQSASMAQIEEKMREAGLPENSKTVLYNGLTGVPFVNPVFCGYIYYLK LHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGAANTLQELLTIKSDDMNGRVKIYESIVKGEPA TTAGMPEAFNVLVQEIRGLALDMSVYDSKGRQVPLTERDEELIAKQSKGSLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 47 |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SpiBuddy_2857 | YP_004248859.1 | DNA-directed RNA polymerase subunit beta | AE000516.2.gene708.p | Protein | 0.0 | 54 |
| SpiBuddy_2857 | YP_004248859.1 | DNA-directed RNA polymerase subunit beta | NC_012469.1.7686402. | Protein | 0.0 | 49 |
| SpiBuddy_2857 | YP_004248859.1 | DNA-directed RNA polymerase subunit beta | CP004022.1.gene2794. | Protein | 0.0 | 47 |
| SpiBuddy_2857 | YP_004248859.1 | DNA-directed RNA polymerase subunit beta | CP000675.2.gene392.p | Protein | 0.0 | 47 |
| SpiBuddy_2857 | YP_004248859.1 | DNA-directed RNA polymerase subunit beta | NC_009085.4918494.p0 | Protein | 0.0 | 47 |
| SpiBuddy_2857 | YP_004248859.1 | DNA-directed RNA polymerase subunit beta | NC_010400.5987325.p0 | Protein | 0.0 | 47 |
| SpiBuddy_2857 | YP_004248859.1 | DNA-directed RNA polymerase subunit beta | NC_010410.6003841.p0 | Protein | 0.0 | 47 |
| SpiBuddy_2857 | YP_004248859.1 | DNA-directed RNA polymerase subunit beta | NC_011586.7046027.p0 | Protein | 0.0 | 47 |
| SpiBuddy_2857 | YP_004248859.1 | DNA-directed RNA polymerase subunit beta | NC_010611.6233925.p0 | Protein | 0.0 | 47 |
| SpiBuddy_2857 | YP_004248859.1 | DNA-directed RNA polymerase subunit beta | NC_011595.7060572.p0 | Protein | 0.0 | 47 |
| SpiBuddy_2857 | YP_004248859.1 | DNA-directed RNA polymerase subunit beta | NC_002695.1.914942.p | Protein | 0.0 | 46 |
| SpiBuddy_2857 | YP_004248859.1 | DNA-directed RNA polymerase subunit beta | CP001918.1.gene250.p | Protein | 0.0 | 46 |
| SpiBuddy_2857 | YP_004248859.1 | DNA-directed RNA polymerase subunit beta | CP000034.1.gene3741. | Protein | 0.0 | 46 |
| SpiBuddy_2857 | YP_004248859.1 | DNA-directed RNA polymerase subunit beta | NC_002516.2.881699.p | Protein | 0.0 | 46 |
| SpiBuddy_2857 | YP_004248859.1 | DNA-directed RNA polymerase subunit beta | CP001138.1.gene4362. | Protein | 0.0 | 46 |
| SpiBuddy_2857 | YP_004248859.1 | DNA-directed RNA polymerase subunit beta | CP000647.1.gene4402. | Protein | 0.0 | 46 |
| SpiBuddy_2857 | YP_004248859.1 | DNA-directed RNA polymerase subunit beta | CP002695.1.gene18.p0 | Protein | 0.0 | 45 |
