Gene Information

Name : SpiBuddy_2869 (SpiBuddy_2869)
Accession : YP_004248871.1
Strain : Sphaerochaeta globosa Buddy
Genome accession: NC_015152
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 3096945 - 3099518 bp
Length : 2574 bp
Strand : -
Note : TIGRFAM: chaperonin ClpB; PFAM: ATPase, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; Clp ATPase, C-terminal; KEGG: ssm:Spirs_0929 ATP-dependent chaperone ClpB; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGAATATTGATACGATGACCATCAAATTGCGTCAGGCACTCTCTGATGCAGATGTACTAGCGAATGAACACGGTAATGC
AGAGATTACCACCGAACACCTGATCTTGGCCCTGCTGGACCAAAAAGAAGGGCTGCTGCCGCCGCTTCTGGAGCGGTTGG
GGGTTCCTTTGAAGCAGGTGAAAGAGAAGATCGAGGACCTGGTTAACCGACTTCCCAAAGCCTATGGCTCGAATGTCCAG
CGGTCTCTTTCCGCCCAGCTGGGCAGCGAGTTGTATGCAGCGGACAAGGTGGCTGCTGAATTCAAGGACCAGTATCTGAG
TGCCGAGCACGTTTTGCTCGCGATTTTGGATGATGGCAGCCAGGCAAGCAAGACGCTCAAAGCCTTGGGATTGACCAAGG
ATGCGGTAATGCAGGCTTTGCAAAGCATCCGGGGGAACCAGAGTATCCAAAGCGAGGACCCTGAAAGCCGCTACCAAGCC
CTAGAGAAGTACTGCAGGGATATGACGACTCTTGCCCGTCAAGGAAAGTTGGACCCTGTTATCGGCCGTGATGAGGAGAT
CCGCAGATTGATGCAGGTCCTCTCCCGAAAGACAAAGAACAATCCAGTTCTTATCGGTGAACCCGGTGTAGGAAAAACCG
CCATCGTTGAAGGGCTCGCCCTGCGCATTGCCTCCGGTGACGTACCTGAGTCGCTCAAGGGCAAACGTTTGCTCAGCCTG
GACGTCGGTTCATTGGTGGCCGGTGCCAAGTACCGTGGAGAGTTTGAGGAGCGACTGAAGGCTGTAGTCAAGGAAGTCAC
TTCCAGTGAAGGGGCGATCATCCTGTTCATCGATGAATTGCATACCATCGTTGGGGCGGGGGCCAGTGAAGGTTCAACCG
ATGCTTCAAACCTCATCAAGCCAGCTCTCAGCCGCGGCGAGCTTCATACCATCGGGGCAACAACCTTGGATGAGTACCGC
AAGTACATCGAACCGGATAAAGCCTTGGAGCGTCGCTTCCAGCCGGTCTATACCAAGGAACCATCGGTGGAGTCGACGAT
AGCCATCCTTCGCGGGCTTAAGGACCGTTACGAAGTGCACCATGGGGTGCGGATAAAGGATGAGGCGTTGGTGGCGGCGG
CTACATTGAGCAACCGGTATATCACCAACCGCTTCCTTCCGGACAAGGCAATCGACTTAGTGGATGAGGCGGCAAGCCAG
CTGAAAATGGAGATTGAGAGCCAACCGGATGAGTTGGACCAGGCCGAGCGCAAGATACTGCAGTTGAACATCGAGGACCA
AGCTCTGAGCCGTGAGACCGACAAGGCAAGCAACGAACGGCGTGAAAAATTGCACAAGGAGCTTGGGGAGCTGAAGAACA
AGCGTGATGCCATGCATCTGCAGTGGGTCAACGAACGATCGTTCATTGCCAAGCTTCGTGAGCATAAAGCCAGGTTGGAA
CAGTTGAATCTCGAGGAGCAACGAGCGGAGCGCGAAGGCGACCTTGCAAAGGCTGCCCAGATCAAACACGGCCAGATTCC
TGAGTTGATGCATCAGATCGAAACGATGAACCAGCAGTTGGCCGGCGTGCAGACAGAGGGCAAGCAGATGCTGCGTGAAG
AGGTCAGCGAGGATGATATCGCCCGCATCGTCAGCAATTGGACGGGCGTACCGATTGCAAAAATGAAGGGCAGTGAGATG
GAAAAATTCCTGCATCTGGAAGAGACGCTTGCCAAACAGGTGGTCGGTCAGAGACAGGCGATACAAGCGGTAAGCAATGC
CATCCGACGTAATAAGGCCGGGATTGCCGACGAGCACAAGCCTTTGGGGACCTTTTTGTTTGCCGGACCTACGGGAGTGG
GAAAGACTCTGCTCGCTAAAGTCCTTGCGCAGCTGCTTTTTGACGATGAGAAGTCCTTGACCCGTATCGATATGAGTGAG
TATATGGAGAAATTCTCGGTCAGCCGACTCATTGGTGCGCCTCCGGGATATGTAGGATATGATCAAGGCGGTCAACTTAC
CGAGGTAGTCAGAAGGAGGCCCTATTCGGTCATTCTTTTCGATGAAATCGAGAAGGCTCATCCGGATGTCTTCAATGTAC
TGCTCCAACTGCTTGACGATGGTCGTCTGACCGATGGGCAGGGCAGAGTGGTCGACTTCACCAATACGGTGATCATCATG
ACCAGCAACCTGGGTAGCCAGCAGCTGCTTGCTTCCCAAGACCATGCAGAGGGGGTGAAGTTGGTGACCCAGATCATTAA
CAACTCCTTCAAACCGGAGTTCATCAACCGTCTGGATGAGATCATCGTTTTTGAACGATTGGGAGAGGACCAGATACGCC
AAATTGTAAGCCTGCAGCTGAAACAGCTCCAATTGCGGCTTGAAAAACGCGGTTTCTCACTGAGTTGGGATTCCGAAGTG
GTGGAATTGCTCTATCGCGAAGGTTACAATCCTGCGTTTGGGGCGAGACCCATCAAGCGGGCCATCCAAAGGCTGGTAGA
GGATCCATTGTCGATCCAGCTGCTTGGCGGCCGTTTTGCCCCGGGTTCTGCAATCCGTCTTACTTTGCAAGGCTCTGAGG
TGGTTGCTCTCTAG

Protein sequence :
MNIDTMTIKLRQALSDADVLANEHGNAEITTEHLILALLDQKEGLLPPLLERLGVPLKQVKEKIEDLVNRLPKAYGSNVQ
RSLSAQLGSELYAADKVAAEFKDQYLSAEHVLLAILDDGSQASKTLKALGLTKDAVMQALQSIRGNQSIQSEDPESRYQA
LEKYCRDMTTLARQGKLDPVIGRDEEIRRLMQVLSRKTKNNPVLIGEPGVGKTAIVEGLALRIASGDVPESLKGKRLLSL
DVGSLVAGAKYRGEFEERLKAVVKEVTSSEGAIILFIDELHTIVGAGASEGSTDASNLIKPALSRGELHTIGATTLDEYR
KYIEPDKALERRFQPVYTKEPSVESTIAILRGLKDRYEVHHGVRIKDEALVAAATLSNRYITNRFLPDKAIDLVDEAASQ
LKMEIESQPDELDQAERKILQLNIEDQALSRETDKASNERREKLHKELGELKNKRDAMHLQWVNERSFIAKLREHKARLE
QLNLEEQRAEREGDLAKAAQIKHGQIPELMHQIETMNQQLAGVQTEGKQMLREEVSEDDIARIVSNWTGVPIAKMKGSEM
EKFLHLEETLAKQVVGQRQAIQAVSNAIRRNKAGIADEHKPLGTFLFAGPTGVGKTLLAKVLAQLLFDDEKSLTRIDMSE
YMEKFSVSRLIGAPPGYVGYDQGGQLTEVVRRRPYSVILFDEIEKAHPDVFNVLLQLLDDGRLTDGQGRVVDFTNTVIIM
TSNLGSQQLLASQDHAEGVKLVTQIINNSFKPEFINRLDEIIVFERLGEDQIRQIVSLQLKQLQLRLEKRGFSLSWDSEV
VELLYREGYNPAFGARPIKRAIQRLVEDPLSIQLLGGRFAPGSAIRLTLQGSEVVAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-98 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SpiBuddy_2869 YP_004248871.1 ATP-dependent chaperone ClpB VFG2084 Protein 2e-109 42