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Name : Odosp_1964 (Odosp_1964) Accession : YP_004253150.1 Strain : Odoribacter splanchnicus DSM 220712 Genome accession: NC_015160 Putative virulence/resistance : Unknown Product : DNA-directed RNA polymerase subunit beta Function : - COG functional category : K : Transcription COG ID : COG0085 EC number : - Position : 2351787 - 2355599 bp Length : 3813 bp Strand : - Note : COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; HAMAP: DNA-directed RNA polymerase, beta subunit, bacterial-type; InterProIPR010243: IPR007644: IPR007642: IPR007645: IPR 019462: IPR007120: IPR007641; KEGG: bvu:BVU_0813 DNA-directed DNA sequence : ATGTCTTCAAATACTTCAAACAAAAGAATAAGCTTTGCCTCCACGAAAAATCAGTTGCAATATCCTGATTTTCTTGAAGT GCAATTAAAGTCTTTCAAGGACTTTTTTCAATTGGGTACGACGCCTGAAAACAGAAAGAACGAAGGCCTGTATACTGTTT TCAAGGAGAACTTCCCAATCACCGACACCCGGAACAATTTTGTTCTGGAATTTTTGGACTACTTCATCGACCCGCCCCGT TATTCGATAGACGAATGTCTGGAGCAAGGATTGACTTACGGAGCTCCGTTGAAGGCCAAACTGAAGTTGTATTGTACGGA TCCCGAACACGAGGATTTCGACACGGTGATTGAAGACGTATATCTGGGGAATGTTCCGTATATGACGCCCAAAGGCACCT TTGTGATTAACGGAGCCGAGCGTGTGATCGTATCTCAGTTGCACAGATCACCGGGTGTATTTTTCGGACAGAGCGTTCAT GCTAATGGTACCAAACTTTATTCCGCCAGAATTATCCCGTTCAAGGGTTCCTGGATCGAGTTCGCGACAGACATCAACAA TGTGATGTATGCTTACATCGACCGGAAGAAAAAATTGCCGGTAACGACTTTGTTACGTGCTATCGGCTTTGAGACGGATA AGGATATCTTGCAGATATTCGACCTGGCGGATGAAATAAATGTTTCCAAAACGGGATTGAAAAAAGTCGTTGGCCGTCGG TTGGCTGCGCGTGTTTTGAAGACCTGGGTGGAAGATTTCGTGGATGAAGATACCGGTGAGGTGGTTTCTATCGAACGAAA CGAAATCATTGTGGATCGGGAAACTGTTCTGGAAAATGAACATATTGATGCAATCGTCGATTCAGGTGCAAAGACGATTC TGTTGCATAAAGAAAAGCAAAATCTGGCAGATTATGCCATTATATACAATACACTGCAAAAAGACCCGTGTAACTCGGAA AAAGAAGCAGTGATGCACATCTATAGACAGCTGCGTAGCTCAGAACCACCTGACGAAGCGACTGCCCGTGATGTTATCGA TAAATTGTTCTTCTCTGACAAGCGCTACGACCTGGGAGATGTTGGACGTTACAAGTTGAATAAAAAACTGGGACTTTCTA CCGATCCGGCTGTTCGGGTGCTGACCAAAGAAGATATGATCGAGATTATCAAATATCTGATCAAGCTGTTGAATGCCCGT ACAGATGTAGATGATATCGACCACTTGAGCAACCGTCGTGTACGTACTGTAGGCGAACAGTTGTACAATCAGTTCGGTGT CGGGCTGGCCCGTATGGCCCGTACAATCCGTGAACGGATGAACGTTCGTGACAATGAGGTGTTTACTCCGGTAGATCTGA TCAATTCCAAGATCCTGTCTTCTGTGATCAACTCTTTCTTCGGTACGAATGCGCTGTCACAGTTTATGGACCAGACGAAC CCGCTGGCTGAGATTACACATAAACGTCGTATGTCGGCCTTAGGACCTGGTGGTCTTTCCCGTGACCGTGCCGGATTCGA GGTGCGTGACGTTCACTATACCCACTACGGACGACTTTGTCCGATCGAGACCCCGGAAGGTCCGAATATCGGTTTGATTT CTTCACTTTGTGTATATGCAAAAATCAACGATTTAGGATTTATCGAAACTCCTTACCGGAAGGTGGAGGCCGGAGTGGTG GATCTGTCACCGGAAGGGGTGAAATATTTATCGGCAGAGGAAGAAGAAGGACTGGTAATCGCTCAGGCGAATGCGAAGAT CGACGACGAAGGTCACTTTGTGAACAAACGGGCTAAATCCCGTAAAGACGGAGACTTCCCGGTTGAAGAGATCGAGAATG TCAATCTGATGGACGTTGCACCTAATCAGATTGCTTCTATCGCCGCTTCTTTGATTCCGTTCCTGGAACATGACGATGCC AACCGTGCCTTGATGGGGTCTAACATGATGCGTCAGGCTGTGCCTATCATCAAGCCGCAGGCTCCGATTGTAGGAACCGG TTTGGAAGGTGCTTTGGTGCGGGATTCCCGGACACAGATCGTAGCAGAAGGACCTGGTGTTGTCGATTTCGTGGATGGAC GCCGGATCGTGATCAAATACGACCAGACCGAAGAAGAACGTTTTGTAAGCTTTGACGGGGATACGAAAGAGTATGTCCTG CCGAAATATAAACGTACCAACCAGAGTACGACCATGACTTTACGTCCGATAGTCCGTAAAGGACAGCGCGTAGAGGAAGG GGAAATCCTGACCGAAGGATATTCTTCGGAAGGAGGTGAACTGGCACTCGGACGTAACCTGAAAGTGGCTTATATGCCCT GGAAAGGGTATAACTATGAGGATGCTATCGTGATCTCTGAAAATATCGTTCGTAACGATGTATTTACTTCTGTACATGTG GATGAATATTCACTGGAAGTGCGCGAAACGAAACGAGGTTTGGAAGAGTTGACCGCCGATATCCCCAATGTCAGTGAAGA TGCTACGAAGGATCTGGATGAAAACGGTATTATCCGCATCGGAGCCCGTGTGAAACCGGGAGATATCCTGATCGGTAAGA TTACCCCGAAAGGAGAATCCGATCCGAGTCCGGAAGAAAAATTGCTGCGTGCGATCTTCGGTGATAAAGCCGGTGATGTG AAAGATGCTTCTCTGAAAGCTTCTCCTTCACTGAGCGGTGTCATTATCGATAAAAAATTGTTCCAGCGGATGATCGGCGA CCGGAAATCGAAAGCTGCAGGTAAGACGATCCTGGCTGAAATCGACGAACAATTCGAACGGAAAGTAGGCGATTTAACCG ATTTGCTGATCGACAAATTGTTCGAACTGACCAATGGGAAGACTTCTCAGGGAGTGAAGAATTACCTGAACGAAGATGTT ATTCCGAAAGGCGTGAAGTTTACGCTGAAAACCTTGCAAAATCTGAATTATCTGGAAATCAATCCGAACAAGTGGACGAC AGATAAACAGAAGAACGATATGATCCGTGATTTGCTGCACAACTTTGTGATCAAATACAAGGAGATCGAAGGACAGATGA AGCGTAAAAAATATAATGCTACTGTCGGAGACGAACTTCCTTCCGGCATCATCAAAATGGCTAAAGTTTACGTAGCGAAA AAACGTAAATTGCAGATCGGTGATAAGATGGCAGGACGTCACGGTAATAAAGGTATCGTATCCCGTGTTGTAAGGGTTGA AGATATGCCGTTCCTGGCCGACGGTACTCCGGTGGATATTTGTTTGAATCCGTTGGGTGTACCTTCCCGTATGAACCTGG GACAGATTTTCGAAGCTGTATTGGGCTGGGCCGGTAAAGAATTGGGATTGAAATTCGCTACTCCGATTTTCGACGGTGCA AGCCTGGACGATATCAATGCCTATACCGATAAAGCCGGTGTGCCTCGTTACGGTACAACCTACCTGTATGACGGTGGTAC CGGTGAACGTTTCGACCAGCCGGCGACAGTAGGAGTGACCTACTTCCTGAAACTGGGGCACATGGTAGATGATAAAATGC ATGCCCGTTCGATCGGACCGTACTCGTTGATTACGCAACAGCCTTTGGGTGGTAAAGCTCAATTCGGTGGGCAGCGTTTC GGTGAGATGGAGGTTTGGGCTCTGGAAGCTTTCGGAGCTGCTCATATCCTGCAGGAAATCCTGACCGTGAAGTCTGACGA TGTAATGGGCCGTACCAAAACTTACGAGCATATCGTAAAAGGAGAGCCTATGCCTACCCCGGGTCTGCCCGAATCATTCA ACGTATTGTTGCATGAGCTGAGAGGACTGGGATTAAGCGTGAACTTGATATAA Protein sequence : MSSNTSNKRISFASTKNQLQYPDFLEVQLKSFKDFFQLGTTPENRKNEGLYTVFKENFPITDTRNNFVLEFLDYFIDPPR YSIDECLEQGLTYGAPLKAKLKLYCTDPEHEDFDTVIEDVYLGNVPYMTPKGTFVINGAERVIVSQLHRSPGVFFGQSVH ANGTKLYSARIIPFKGSWIEFATDINNVMYAYIDRKKKLPVTTLLRAIGFETDKDILQIFDLADEINVSKTGLKKVVGRR LAARVLKTWVEDFVDEDTGEVVSIERNEIIVDRETVLENEHIDAIVDSGAKTILLHKEKQNLADYAIIYNTLQKDPCNSE KEAVMHIYRQLRSSEPPDEATARDVIDKLFFSDKRYDLGDVGRYKLNKKLGLSTDPAVRVLTKEDMIEIIKYLIKLLNAR TDVDDIDHLSNRRVRTVGEQLYNQFGVGLARMARTIRERMNVRDNEVFTPVDLINSKILSSVINSFFGTNALSQFMDQTN PLAEITHKRRMSALGPGGLSRDRAGFEVRDVHYTHYGRLCPIETPEGPNIGLISSLCVYAKINDLGFIETPYRKVEAGVV DLSPEGVKYLSAEEEEGLVIAQANAKIDDEGHFVNKRAKSRKDGDFPVEEIENVNLMDVAPNQIASIAASLIPFLEHDDA NRALMGSNMMRQAVPIIKPQAPIVGTGLEGALVRDSRTQIVAEGPGVVDFVDGRRIVIKYDQTEEERFVSFDGDTKEYVL PKYKRTNQSTTMTLRPIVRKGQRVEEGEILTEGYSSEGGELALGRNLKVAYMPWKGYNYEDAIVISENIVRNDVFTSVHV DEYSLEVRETKRGLEELTADIPNVSEDATKDLDENGIIRIGARVKPGDILIGKITPKGESDPSPEEKLLRAIFGDKAGDV KDASLKASPSLSGVIIDKKLFQRMIGDRKSKAAGKTILAEIDEQFERKVGDLTDLLIDKLFELTNGKTSQGVKNYLNEDV IPKGVKFTLKTLQNLNYLEINPNKWTTDKQKNDMIRDLLHNFVIKYKEIEGQMKRKKYNATVGDELPSGIIKMAKVYVAK KRKLQIGDKMAGRHGNKGIVSRVVRVEDMPFLADGTPVDICLNPLGVPSRMNLGQIFEAVLGWAGKELGLKFATPIFDGA SLDDINAYTDKAGVPRYGTTYLYDGGTGERFDQPATVGVTYFLKLGHMVDDKMHARSIGPYSLITQQPLGGKAQFGGQRF GEMEVWALEAFGAAHILQEILTVKSDDVMGRTKTYEHIVKGEPMPTPGLPESFNVLLHELRGLGLSVNLI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 44 |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Odosp_1964 | YP_004253150.1 | DNA-directed RNA polymerase subunit beta | CP002695.1.gene18.p0 | Protein | 0.0 | 45 |
| Odosp_1964 | YP_004253150.1 | DNA-directed RNA polymerase subunit beta | NC_009085.4918494.p0 | Protein | 0.0 | 45 |
| Odosp_1964 | YP_004253150.1 | DNA-directed RNA polymerase subunit beta | CP000675.2.gene392.p | Protein | 0.0 | 45 |
| Odosp_1964 | YP_004253150.1 | DNA-directed RNA polymerase subunit beta | NC_011035.1.6448762. | Protein | 0.0 | 45 |
| Odosp_1964 | YP_004253150.1 | DNA-directed RNA polymerase subunit beta | CP004022.1.gene2794. | Protein | 0.0 | 44 |
| Odosp_1964 | YP_004253150.1 | DNA-directed RNA polymerase subunit beta | NC_002695.1.914942.p | Protein | 0.0 | 44 |
| Odosp_1964 | YP_004253150.1 | DNA-directed RNA polymerase subunit beta | CP001138.1.gene4362. | Protein | 0.0 | 44 |
| Odosp_1964 | YP_004253150.1 | DNA-directed RNA polymerase subunit beta | CP000034.1.gene3741. | Protein | 0.0 | 44 |
| Odosp_1964 | YP_004253150.1 | DNA-directed RNA polymerase subunit beta | NC_010611.6233925.p0 | Protein | 0.0 | 44 |
| Odosp_1964 | YP_004253150.1 | DNA-directed RNA polymerase subunit beta | NC_011595.7060572.p0 | Protein | 0.0 | 44 |
| Odosp_1964 | YP_004253150.1 | DNA-directed RNA polymerase subunit beta | NC_010410.6003841.p0 | Protein | 0.0 | 44 |
| Odosp_1964 | YP_004253150.1 | DNA-directed RNA polymerase subunit beta | NC_011586.7046027.p0 | Protein | 0.0 | 44 |
| Odosp_1964 | YP_004253150.1 | DNA-directed RNA polymerase subunit beta | NC_010400.5987325.p0 | Protein | 0.0 | 44 |
| Odosp_1964 | YP_004253150.1 | DNA-directed RNA polymerase subunit beta | NC_008702.1.4609796. | Protein | 0.0 | 44 |
| Odosp_1964 | YP_004253150.1 | DNA-directed RNA polymerase subunit beta | CP001918.1.gene250.p | Protein | 0.0 | 43 |
| Odosp_1964 | YP_004253150.1 | DNA-directed RNA polymerase subunit beta | CP000647.1.gene4402. | Protein | 0.0 | 43 |
| Odosp_1964 | YP_004253150.1 | DNA-directed RNA polymerase subunit beta | AE016830.1.gene3155. | Protein | 2e-173 | 43 |
| Odosp_1964 | YP_004253150.1 | DNA-directed RNA polymerase subunit beta | NC_002516.2.881699.p | Protein | 0.0 | 42 |
