Gene Information

Name : Celly_2033 (Celly_2033)
Accession : YP_004262726.1
Strain : Cellulophaga lytica DSM 7489
Genome accession: NC_015167
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 2284188 - 2284379 bp
Length : 192 bp
Strand : -
Note : COGs: COG1278 Cold shock protein; InterPro IPR011129: IPR002059; KEGG: sli:Slin_0668 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Probable CspA5 cold shock protein transcriptional regulator

DNA sequence :
ATGAGTAACGGTACAGTAAAATTTTTTAACGACTCTAAAGGTTTCGGTTTTATCACTCCAGATGATGGTGGTAAAGACGT
TTTTGTTCACATTAGTGGATTAACACACGAAATAGCTGAAGGAGACAAAGTTAGTTATGACGTTGAAGAAGGAAAAAAAG
GACCTAATGCAGTAAACGTTGAAGTCCTTTAA

Protein sequence :
MSNGTVKFFNDSKGFGFITPDDGGKDVFVHISGLTHEIAEGDKVSYDVEEGKKGPNAVNVEVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 3e-12 56
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 0.010 42