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Name : Celly_0524 (Celly_0524) Accession : YP_004261230.1 Strain : Cellulophaga lytica DSM 7489 Genome accession: NC_015167 Putative virulence/resistance : Unknown Product : DNA-directed RNA polymerase subunit beta Function : - COG functional category : K : Transcription COG ID : COG0085 EC number : - Position : 580916 - 584725 bp Length : 3810 bp Strand : - Note : COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; HAMAP: DNA-directed RNA polymerase, beta subunit, bacterial-type; InterProIPR007644: IPR007642: IPR007645: IPR019462: IPR 007120: IPR007641: IPR010243; KEGG: fbc:FB2170_16181 DNA-direc DNA sequence : ATGTTCACAAAACAGACTCAAAGAATAAATTTTGCATCAGCTAAGAATATTCCAGATTACCCGGATTTCTTGGACATTCA GATTAAATCATTTCAGGATTTCTTCCAACTTGAAACTAAATCTGATGAAAGAGGCGACGAAGGTTTGTATAATACCTTCT TGGAAAACTTTCCAATTACTGACACAAGAAATCAATTCGTATTAGAGTTTCTTGATTACTTTATTGATCCACCTAGATAT TCTATTCAAGAATGTATAGAAAGAGGGTTAACCTATAGTGTTCCACTAAAGGCAAGACTAAAACTTTATTGTACGGACCC AGAACATGAAGATTTTGAAACTATAGTACAAGATGTGTACTTAGGAACAATTCCTTACATGACACCAAGTGGTACATTTG TTATTAATGGTGCAGAACGTGTTGTTGTATCTCAATTACACCGTTCTCCAGGGGTTTTCTTCGGACAGTCTTTCCATGCT AACGGTACTAAATTGTATTCTGCAAGAGTAATTCCTTTTAAAGGCTCTTGGATAGAATTTGCAACAGATATCAATGGCGT TATGTACGCTTACATTGATAGAAAGAAAAAATTACCAGTAACAACCTTATTTAGAGCTATTGGCTTTGAACGTGATAAGG ATATTTTGGAAATCTTTGATTTATCAGAAGAAATCAAAGTTTCAAATGCTGGACTTAAAAAAGTATTAGGACGTAAGCTT GCAGCTAGAGTATTAAATACTTGGCACGAGGATTTCGTAGATGAGGATACAGGTGAAGTTGTTTCTATAGAAAGAAACGA AATTGTATTAGATAGAGATACAGTTCTTGAAAAAGAACACATTGCCGAAATTATGGAGGCAGATGTAAAAACTATTCTTT TACATAAAGAGAATAATGCACAATCTGATTATGCAATTATTCATAATACATTACAAAAAGATCCAACAAACTCAGAAAAA GAGGCTGTTGAGCATATTTATAGACAATTACGTAATGCTGAGCCGCCAGATGAGGAAACAGCACGTGGTATTATAGATAA ATTATTCTTCTCTGACCAACGTTACAACTTAGGTGAAGTAGGTCGTTATAGAATGAATAAAAAATTACAGTTAGATATTG GAATGGACAAGCAAGTCTTGACTAAAGAAGATATTATAACTATTATTAAATACTTAATAGAGCTTATAAACTCTAAAGCA GAGATTGATGATATTGACCACTTGTCTAACCGTCGTGTACGTACAGTAGGTGAGCAATTATCTCAGCAGTTTGGTGTAGG ACTTGCTCGTATGGCAAGAACTATTCGTGAACGTATGAACGTTAGAGATAACGAAGTATTTACACCTATTGATTTGATTA ATGCAAAGACATTGTCTTCTGTAATTAATTCTTTCTTTGGAACAAACCAGTTATCTCAGTTTATGGATCAAACAAATCCA TTAGCAGAAATAACACACAAACGTAGATTGTCTGCCCTTGGGCCAGGTGGTTTATCAAGAGAAAGAGCAGGGTTTGAGGT ACGTGATGTTCACTATACACACTACGGTAGACTTTGTCCTATTGAGACTCCTGAAGGACCAAATATTGGACTTATTTCTT CATTGTCTGTATATGCAAAAGTGAATCCTATGGGATTCTTAGAAACTCCTTACCGTAAGGTTACTAATGGTGTTGTAGAT ACAGAAGAATATGCATATTTAAGTGCAGAGGAAGAGGAAGGTATGAAAATATCTCAAGCCAATATTCCTTTAAAAGAAGA TGGAGAAATAGATGTAGATAAGGTTATTGCTCGTGAAGAGGGTGATTTCCCAGTTGTAGATCCTGCAGAAATTAATTATA CAGACGTTGCTCCAAATCAAATTGCATCAATATCTGCCTCTTTAATTCCGTTCTTAGAACATGATGATGCCAACCGTGCA TTGATGGGATCTAACATGATGCGTCAGGCAGTTCCTTTGTTAAGACCAGAATCTCCAATTGTTGGTACTGGTTTAGAACG TCAGGTAGCATCAGACTCTAGAGTTTTAATTAACGCAGAAGGAGATGGTGTTGTTGAGTATGTAGATTCTCAAAAAGTTA CTATTAAGTATGATAGAACTGAAGAGGAACGTTTAGTTAGTTTTGAAGAAGACTCTAAAACATATAACTTGGTTAAGTTT AGAAAAACAAACCAAGGTACAAGTATTAACCTTAAACCTATTGTAGAAAAAGGTGATAAGGTTAAAAAAGGTCAAGTATT ATGTGAAGGTTATGCTACTCAATTAGGAGAGTTAGCCTTAGGTAGAAATATGAAAGTAGCCTTTATGCCTTGGAAAGGGT ATAACTTTGAGGATGCAATTGTGATTTCTGAAAAAGTAGTTCGTGAAGACATTTTTACATCTATACATATTGATGAGTAT TCTTTAGAAGTAAGAGATACTAAATTAGGAGCAGAAGAATTAACACATGATATCCCTAACGTTTCTGAAGAAGCTACTAA AGATTTAGATGAAAACGGGATGATCCGTATAGGTGCAGAAGTTAAACCTGGTGATATTTTAATTGGTAAAATTACTCCAA AAGGAGAATCAGATCCAACACCAGAAGAAAAATTACTTCGTGCTATATTCGGTGATAAGGCAGGAGACGTTAAAGATGCA TCTTTAAAAGCATCACCATCTTTAAGAGGTGTTGTAATAGGTAAGAAATTATTTTCTAGATCTATTAAAGATAAACGTAC TCGTGTAGAAGATAAAGATGCTATTAATAAATTAGAGCTAGAATACGAAGTTAAATTCCAACAGCTTAAAGATATATTAG TAGAAAAACTATTTACATTAGTTAATGGTAAAACATCACAGGGTGTACTTAATGACTTAGGAGAAGAAGTTCTTCCAAAA GGTAAAAAGTACTCTATGAAAATGTTAAACTCTGTTGATGATTTTGCTCACCTTGTAGGTGGAAGCTGGACAGTAGATAA GGATCTTAATGCAATGGTTGCAGATTTAATTCACAACTATAAAATTAAGCTTAACGATCTTCAAGGAAACTTAAGAAGAG ATAAATTTACTATTTCTGTTGGTGATGAGTTACCTCCAGGAATAATGAAATTAGCTAAAGTTTATGTTGCTAAAAAACGT AAACTTAAAGTTGGTGATAAAATGGCTGGTCGTCACGGTAACAAAGGTATTGTTGCCCGTATTGTACGTCATGAAGATAT GCCTTTCTTAGAAGACGGAACTCCAGTAGATATCGTATTAAACCCATTAGGTGTACCATCTCGTATGAACATTGGGCAAA TATATGAGACTGTATTAGGTTGGGCCGGTTTAAAATTAGGCAAAAAGTATGCAACTCCAATTTTTGATGGTGCTACATTA GAACAAATTAACGGATACACAGATGAAGCAGGTATACCACGTTTTGGTCATACTTACTTATACGATGGTGGAACTGGAAA ACGTTTTGATCAGCCAGCAACTGTAGGTGTTATTTACATGCTTAAATTAGGACATATGGTAGATGATAAAATGCACGCTC GTTCTATAGGTCCATATTCTTTAATTACACAACAACCATTAGGTGGTAAAGCACAATTTGGTGGTCAGCGTTTTGGAGAG ATGGAAGTATGGGCACTAGAAGCATATGGTGCGTCTGCAACACTAAGAGAAATATTAACAGTTAAGTCTGATGATGTTAT TGGTAGAGCTAAAACGTATGAGTCTATTGTAAAAGGCGAAACAATGCCAGAACCTGGTTTACCAGAATCTTTCAATGTAT TAATGCATGAACTTAAGGGATTAGGTTTAGATATTAGATTGGAAGAATAA Protein sequence : MFTKQTQRINFASAKNIPDYPDFLDIQIKSFQDFFQLETKSDERGDEGLYNTFLENFPITDTRNQFVLEFLDYFIDPPRY SIQECIERGLTYSVPLKARLKLYCTDPEHEDFETIVQDVYLGTIPYMTPSGTFVINGAERVVVSQLHRSPGVFFGQSFHA NGTKLYSARVIPFKGSWIEFATDINGVMYAYIDRKKKLPVTTLFRAIGFERDKDILEIFDLSEEIKVSNAGLKKVLGRKL AARVLNTWHEDFVDEDTGEVVSIERNEIVLDRDTVLEKEHIAEIMEADVKTILLHKENNAQSDYAIIHNTLQKDPTNSEK EAVEHIYRQLRNAEPPDEETARGIIDKLFFSDQRYNLGEVGRYRMNKKLQLDIGMDKQVLTKEDIITIIKYLIELINSKA EIDDIDHLSNRRVRTVGEQLSQQFGVGLARMARTIRERMNVRDNEVFTPIDLINAKTLSSVINSFFGTNQLSQFMDQTNP LAEITHKRRLSALGPGGLSRERAGFEVRDVHYTHYGRLCPIETPEGPNIGLISSLSVYAKVNPMGFLETPYRKVTNGVVD TEEYAYLSAEEEEGMKISQANIPLKEDGEIDVDKVIAREEGDFPVVDPAEINYTDVAPNQIASISASLIPFLEHDDANRA LMGSNMMRQAVPLLRPESPIVGTGLERQVASDSRVLINAEGDGVVEYVDSQKVTIKYDRTEEERLVSFEEDSKTYNLVKF RKTNQGTSINLKPIVEKGDKVKKGQVLCEGYATQLGELALGRNMKVAFMPWKGYNFEDAIVISEKVVREDIFTSIHIDEY SLEVRDTKLGAEELTHDIPNVSEEATKDLDENGMIRIGAEVKPGDILIGKITPKGESDPTPEEKLLRAIFGDKAGDVKDA SLKASPSLRGVVIGKKLFSRSIKDKRTRVEDKDAINKLELEYEVKFQQLKDILVEKLFTLVNGKTSQGVLNDLGEEVLPK GKKYSMKMLNSVDDFAHLVGGSWTVDKDLNAMVADLIHNYKIKLNDLQGNLRRDKFTISVGDELPPGIMKLAKVYVAKKR KLKVGDKMAGRHGNKGIVARIVRHEDMPFLEDGTPVDIVLNPLGVPSRMNIGQIYETVLGWAGLKLGKKYATPIFDGATL EQINGYTDEAGIPRFGHTYLYDGGTGKRFDQPATVGVIYMLKLGHMVDDKMHARSIGPYSLITQQPLGGKAQFGGQRFGE MEVWALEAYGASATLREILTVKSDDVIGRAKTYESIVKGETMPEPGLPESFNVLMHELKGLGLDIRLEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 46 |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Celly_0524 | YP_004261230.1 | DNA-directed RNA polymerase subunit beta | NC_009085.4918494.p0 | Protein | 0.0 | 46 |
| Celly_0524 | YP_004261230.1 | DNA-directed RNA polymerase subunit beta | NC_011586.7046027.p0 | Protein | 0.0 | 46 |
| Celly_0524 | YP_004261230.1 | DNA-directed RNA polymerase subunit beta | CP000675.2.gene392.p | Protein | 0.0 | 46 |
| Celly_0524 | YP_004261230.1 | DNA-directed RNA polymerase subunit beta | NC_010400.5987325.p0 | Protein | 0.0 | 46 |
| Celly_0524 | YP_004261230.1 | DNA-directed RNA polymerase subunit beta | NC_010611.6233925.p0 | Protein | 0.0 | 46 |
| Celly_0524 | YP_004261230.1 | DNA-directed RNA polymerase subunit beta | NC_011595.7060572.p0 | Protein | 0.0 | 46 |
| Celly_0524 | YP_004261230.1 | DNA-directed RNA polymerase subunit beta | NC_010410.6003841.p0 | Protein | 0.0 | 46 |
| Celly_0524 | YP_004261230.1 | DNA-directed RNA polymerase subunit beta | CP001918.1.gene250.p | Protein | 0.0 | 46 |
| Celly_0524 | YP_004261230.1 | DNA-directed RNA polymerase subunit beta | NC_002695.1.914942.p | Protein | 0.0 | 46 |
| Celly_0524 | YP_004261230.1 | DNA-directed RNA polymerase subunit beta | CP001138.1.gene4362. | Protein | 0.0 | 46 |
| Celly_0524 | YP_004261230.1 | DNA-directed RNA polymerase subunit beta | CP000034.1.gene3741. | Protein | 0.0 | 46 |
| Celly_0524 | YP_004261230.1 | DNA-directed RNA polymerase subunit beta | CP000647.1.gene4402. | Protein | 0.0 | 46 |
| Celly_0524 | YP_004261230.1 | DNA-directed RNA polymerase subunit beta | CP002695.1.gene18.p0 | Protein | 0.0 | 46 |
| Celly_0524 | YP_004261230.1 | DNA-directed RNA polymerase subunit beta | NC_002516.2.881699.p | Protein | 0.0 | 45 |
| Celly_0524 | YP_004261230.1 | DNA-directed RNA polymerase subunit beta | CP004022.1.gene2794. | Protein | 0.0 | 45 |
| Celly_0524 | YP_004261230.1 | DNA-directed RNA polymerase subunit beta | NC_008702.1.4609796. | Protein | 0.0 | 45 |
| Celly_0524 | YP_004261230.1 | DNA-directed RNA polymerase subunit beta | NC_011035.1.6448762. | Protein | 0.0 | 45 |
