Gene Information

Name : Sgly_2937 (Sgly_2937)
Accession : YP_004267207.1
Strain : Syntrophobotulus glycolicus DSM 8271
Genome accession: NC_015172
Putative virulence/resistance : Resistance
Product : sigma-54 interacting domain-containing protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.28
Position : 2986090 - 2986794 bp
Length : 705 bp
Strand : +
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: dsy:DSY4805 hypothetical protein; PFAM: ABC transporter-like; PRIAM: phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR

DNA sequence : 
ATGACGGTCCTGCTCGAGGGTAAAGACATCCGCAAGACCTATCAGACCGGCGAAGTAACGGTAGCTGTTTTAAAGGGACT
TAACTTTCAAATTCTGCAGGGGGAGTTTATTGTCGTTCTCGGCCAAAGCGGCTCAGGCAAAACTACCCTGCTTAATATTT
TGGGGGGCATGACCAAGGCCACCTCCGGCGAGCTTTTCTATAAAGGACATCCGCTTCATCAAGCCAGTGATAAAGAGCTG
ACTCTTTACCGCCGCAATGAAGTGGGTTTTGTTTTTCAGCACTATAATCTGATGTCTAACCTGACCGCTTACGAAAATGT
CAAGCTGGCTTGGGAAATTGCCGAAAATCCTTTGTCTATTGAGGAAATCTTAGGGGATGTGGGCCTTAAGGACTGGTCCG
CCCATTTTCCTTCCCAGCTTTCCGGCGGGCAGCAGCAAAGGATTGCCATAGCCCGGGCCATTGTCAAAAATCCGGAGCTC
CTTCTTTGTGATGAACCTACAGGGGCTTTGGATATTCAGACGGGGATTCAGGTTCTCAAAGCTCTCCAAAAGCTGAATAG
GGAATACCGCAAAACCGTACTGATCATTACTCATAATGCGGAAATCTCTAAGATGTCTAACCGGGTTTTTTATCTGAAAG
ACGGTCTCCTGGACCGGATTGTTGTCAATGAGCATCAGATTCAGCCTGAAGATATTACATGGTAA

Protein sequence : 
MTVLLEGKDIRKTYQTGEVTVAVLKGLNFQILQGEFIVVLGQSGSGKTTLLNILGGMTKATSGELFYKGHPLHQASDKEL
TLYRRNEVGFVFQHYNLMSNLTAYENVKLAWEIAENPLSIEEILGDVGLKDWSAHFPSQLSGGQQQRIAIARAIVKNPEL
LLCDEPTGALDIQTGIQVLKALQKLNREYRKTVLIITHNAEISKMSNRVFYLKDGLLDRIVVNEHQIQPEDITW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-39 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sgly_2937 YP_004267207.1 sigma-54 interacting domain-containing protein NC_012469.1.7685735. Protein 9e-51 51
Sgly_2937 YP_004267207.1 sigma-54 interacting domain-containing protein CP001581.1.gene798.p Protein 1e-44 43
Sgly_2937 YP_004267207.1 sigma-54 interacting domain-containing protein NC_012469.1.7686878. Protein 7e-40 43
Sgly_2937 YP_004267207.1 sigma-54 interacting domain-containing protein NC_012469.1.7686946. Protein 1e-22 42