Gene Information

Name : Plabr_4073 (Plabr_4073)
Accession : YP_004271672.1
Strain : Planctomyces brasiliensis DSM 5305
Genome accession: NC_015174
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 5046318 - 5046605 bp
Length : 288 bp
Strand : +
Note : COGs: COG4577 carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: plm:Plim_1756 microcompartments protein; PFAM: Microcompartment protein, bacteria; SPTR: Probable ethanolamine utilization protein EutM; PFAM: BMC do

DNA sequence : 
ATGGCAAAACCGATGGAAGCACTCGGAATGGTCGAAACCAAAGGCCTGGTCTGCCTGATCGAAGCCGCTGACGCCATGCT
GAAATCTGCCAACGTGCAGATGATCGGCTGGGAAAAAGTTGGTAGCGGTCTGGTCACCGCCTTCGTGACCGGCGATGTTG
CCGCTGTCAAAGCCGCTGTTGACGCCGGCGCTTCTGCTGCCAGCAAAATTGGCGAAGTCATGAGCGTGCAGGTCATTCCT
CGTCCGCACGACGAACTGAGCAGCGTTCTGCCCGCAAAAAAAAACTAG

Protein sequence : 
MAKPMEALGMVETKGLVCLIEAADAMLKSANVQMIGWEKVGSGLVTAFVTGDVAAVKAAVDAGASAASKIGEVMSVQVIP
RPHDELSSVLPAKKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 5e-12 63
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 9e-13 62
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 4e-11 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Plabr_4073 YP_004271672.1 microcompartments protein VFG1597 Protein 2e-12 63
Plabr_4073 YP_004271672.1 microcompartments protein VFG1596 Protein 4e-13 62
Plabr_4073 YP_004271672.1 microcompartments protein VFG1598 Protein 2e-11 58