Gene Information

Name : Plabr_4074 (Plabr_4074)
Accession : YP_004271673.1
Strain : Planctomyces brasiliensis DSM 5305
Genome accession: NC_015174
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 5046681 - 5046950 bp
Length : 270 bp
Strand : +
Note : COGs: COG4577 carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: plm:Plim_1755 microcompartments protein; PFAM: Microcompartment protein, bacteria; SPTR: Microcompartments protein; PFAM: BMC domain

DNA sequence : 
ATGAACGGTGATGCAATCGGTTTCGTCGAAACCAAAGGACTGATCGCACAGATCGAAGCTGCCGATGCCATGCTCAAAGC
AGCTAACGTCGAGCTGGTCAAACAGATTCAAATTGGCGGTGCCTACGTGACAACCGTCGTTCGTGGCGATGTCGGGTCTG
TCCGCGCTGCAGTTGACGCTGGAGCCGAAGCCGCTTCTCGCGTTGGCGAACTCGTGACCGCTCACGTCATTCCGCGTCCG
CAGGGTGACCTGATGGATAATTTTATCTAA

Protein sequence : 
MNGDAIGFVETKGLIAQIEAADAMLKAANVELVKQIQIGGAYVTTVVRGDVGSVRAAVDAGAEAASRVGELVTAHVIPRP
QGDLMDNFI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 3e-13 61
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 1e-13 61
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-12 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Plabr_4074 YP_004271673.1 microcompartments protein VFG1596 Protein 1e-13 61
Plabr_4074 YP_004271673.1 microcompartments protein VFG1597 Protein 5e-14 61
Plabr_4074 YP_004271673.1 microcompartments protein VFG1598 Protein 7e-13 58