|
Name : Pedsa_1279 (Pedsa_1279) Accession : YP_004273668.1 Strain : Pedobacter saltans DSM 12145 Genome accession: NC_015177 Putative virulence/resistance : Unknown Product : adenine-specific DNA-methyltransferase Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : 2.1.1.72 Position : 1513932 - 1515491 bp Length : 1560 bp Strand : - Note : COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR003356: IPR 002296; KEGG: zpr:ZPR_3435 type I restriction-modification system methyltransferase subunit like protein; PFAM: N-6 DNA methylase; PRIAM: Site-specific DNA sequence : ATGGCAAAAAAAGTACAAACAAAATCAACAGAAGAGATACTGTGGGATTCGGCAAATAAATTAAGGGGTTCGGTAGAGCC TTCAGAATATAAGCATGTAGTATTGAGTTTAATTTTCTTAAAGTTTGCAAGTGATAAATTCATCAGACGTAGAGAAGAAC TCATTAAAGAAGGACAAAATGCTTTTCTGGAAATTCCGGAATTCTATCAGGCAGAAAATGTTTTCTATTTGCCTGTGGAA TCACGTTGGACGTATATTATCGAAAACGCCAAACAAGAGGATATCACGCTGAAAGTAGATTCAGCCTTAAAAACCATAGA GCGCACCAATAAATCGTTGGAAGGTGCTTTGCCAGATAATTATTTCTCCCGTTTGGGCTTAGACCAATCCAAGTTTTCGG CTTTATTGGATACCATCAATAACATTGATACCCTACGTGATGAAGCGCAAGATATTGTGGGACGTGTGTACGAATATTTC TTAAGCAAATTTGCCATAGCCGAAGGAAAAGGGAAAGGTGAATTCTATACGCCGAAGTCCATTGTGAACCTGATTGCTGA GATGATAGAACCTTACAAAGGTAAAATCTATGACCCTTCCTGTGGTTCGGGTGGTATGTTTGTACAATCGTTAAAATTTA TTGAAAAACATCAGGGCAATAAAAAAGACATTTCTATTTACGGACAAGAATTGACCAATACCACCTTTAAACTGGCTAAA ATGAACCTGGCTATCCGTGGTATTTCTGCCAATTTAGGAAACAAAGCTGCCGATACTTTTGCTGATGACCAGCACAAAGA ATTGAAAGCGGATTACATCATGGCGAATCCTCCCTTCAATTTAAAAGATTGGCGAGCCGAAAACGAGTTGACTGACGATA CCCGTTGGACTGGTTACGAAGTTCCTCCAAAATCCAATGCCAACTATGCGTGGATTTTGAACATGATTTCGAAACTTTCG CAAAACGGTGTAGCTGGTTTTATCTTAGCCAATGGAGCCCTTTCAGGTGGTGGTGAAGAATACAAAATCCGTAAACAAAT TATAGAAAACGACTTGGTAGAAGCGATTGTGATTTTACCAAGAGCAATGTTTTATTCTACAGATATTTCGGTAACGCTTT GGATTTTGAACCGTAACAAAACAGAACGTACGGTTGAAGTTAACGATGGTATAAAGAACTACCGTAATCGTAAAGGTGAA GTGTTGTTTATGGATTTACGTCAAAAAGGAGAACCTTTTGAAAAGAAATTTATTCAGTTCTCTGAAAATGATATTGAATA CATTACAGGAACCTATCATAATTGGCAACAGAAAGATTTTGAATCGAAATATACTAACGAAGCAGAATATTGTTACAGCG CAAACGTAGAAGAAATCCGTAAAAAAGATTATTCTTTAGTACCGAGTAAATACATTGAGTTTGTGAACCGTGATGAAAAT TTAGATTACGATACGCAAATGCAAAGTTTACAAACGGAATTGAAAGATTTGTTTCAACAAGAAGAAGCATTGAAACAAGA AGTAGCTAATGTGTTTAAATCGTTAGGTTATGAGTTATAA Protein sequence : MAKKVQTKSTEEILWDSANKLRGSVEPSEYKHVVLSLIFLKFASDKFIRRREELIKEGQNAFLEIPEFYQAENVFYLPVE SRWTYIIENAKQEDITLKVDSALKTIERTNKSLEGALPDNYFSRLGLDQSKFSALLDTINNIDTLRDEAQDIVGRVYEYF LSKFAIAEGKGKGEFYTPKSIVNLIAEMIEPYKGKIYDPSCGSGGMFVQSLKFIEKHQGNKKDISIYGQELTNTTFKLAK MNLAIRGISANLGNKAADTFADDQHKELKADYIMANPPFNLKDWRAENELTDDTRWTGYEVPPKSNANYAWILNMISKLS QNGVAGFILANGALSGGGEEYKIRKQIIENDLVEAIVILPRAMFYSTDISVTLWILNRNKTERTVEVNDGIKNYRNRKGE VLFMDLRQKGEPFEKKFIQFSENDIEYITGTYHNWQQKDFESKYTNEAEYCYSANVEEIRKKDYSLVPSKYIEFVNRDEN LDYDTQMQSLQTELKDLFQQEEALKQEVANVFKSLGYEL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 1e-118 | 49 |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 2e-118 | 49 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 2e-119 | 49 |
