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Name : Pedsa_0390 (Pedsa_0390) Accession : YP_004272794.1 Strain : Pedobacter saltans DSM 12145 Genome accession: NC_015177 Putative virulence/resistance : Unknown Product : RNase HI Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 480865 - 481335 bp Length : 471 bp Strand : - Note : COGs: COG0328 Ribonuclease HI; InterPro IPR002156; KEGG: phe:Phep_2969 ribonuclease H; PFAM: ribonuclease H; PRIAM: Ribonuclease H; SPTR: Ribonuclease H; PFAM: RNase H DNA sequence : ATGATTGAATTGTTCACAGACGGCGCTGCGAGTGGGAATCCTGGTCCGGGAGGATACGGAGTTATACTTCGTTCCGGACC TCATTATAAAGAAATTTCGGACGGTTTTAGATTAACAACCAACAATAGAATGGAGCTTCTTGCTGTGTGCATTGGTCTTG AGGCTATAAAAAAGCCAGGGCAAAATGTTACCATTTACTCCGATTCCAAATATGTAATAGATGCAATAGACAAAAAATGG GTATTTGGCTGGGTAAAAAAAGGATTCGAAGGAAAGAAAAATAAAGATTTATGGCTTAGGCTTTTAAACTCCTACCGCTT GCATCACATCAAATTGGTTTGGGTAAAGGGTCATGCCGGACATCCTGAAAACGAACGCTGCGATCAGCTAGCGGTACAGG CAAGCAAAGGAAGTAATTTAAAAATAGACAGTGTTTTCGAAATGGAAAATAAAAAAAGCAGCCTGATATAG Protein sequence : MIELFTDGAASGNPGPGGYGVILRSGPHYKEISDGFRLTTNNRMELLAVCIGLEAIKKPGQNVTIYSDSKYVIDAIDKKW VFGWVKKGFEGKKNKDLWLRLLNSYRLHHIKLVWVKGHAGHPENERCDQLAVQASKGSNLKIDSVFEMENKKSSLI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 1e-24 | 47 |
