Gene Information

Name : fliI (AGROH133_03952)
Accession : YP_004277808.1
Strain :
Genome accession: NC_015183
Putative virulence/resistance : Virulence
Product : flagellum-specific ATP synthase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.14
Position : 504700 - 506106 bp
Length : 1407 bp
Strand : -
Note : involved in type III protein export during flagellum assembly; Flagellar biosynthesis/type III secretory pathway ATPase

DNA sequence :
ATGACAATGCCGGAATCCACGCTCACGGTCGAGGCGATTTCACCGAAGCTCGCCCAGCTGGCCAGCCTTGCCGGACACTA
TGCCGATCCGGAGTTTTCGGTGGCGCCGGGCGGCCATGTCCGCACCATCGCCGCCGGACACTACACGGTTTCCGGCCTGT
CGCGGCATGTGAGGCTGGGCGAGTTCGTCGCCCATCGCAGCGCGACCGGTATCCATCTCGGCGAAGTCGTGCGCGTGGAA
CCCGATATCTGCTACGTCTGCCCCATCGAACCGGGCGAGCCGATTGGCATTCACGACACCGTCATCCGCAAGGGTGCCTT
CCGCGTTGCGCCTGACGACAGCTGGTGCGGCCGCACCATCAATGCGCTTGGCGAACCCATCGATGGCAAGGGTCCGCTTG
CATCAGGTACGGAGCGCCGTCCGATTTCCAGCAATGCACCGCCGTCGATGACGCGCAAGCGGGTGGAGACGCCTTTCAAG
ACGGGTGTCCGGGCAATCGATATTTTCTCGCCTCTCTGCCTTGGTCAGCGTCTCGGCATTTTTGCGGGCTCAGGCGTGGG
CAAATCCACGCTGCTATCGATGCTTGCCAAGGCCGATGCCTTCGACAAGGTCGTCATCGGACTTGTCGGCGAGCGCGGTC
GCGAAGTGCGCGAGTTCATCGAAGATACGATGGGCGAGAATATGGGCAAGTCCGTCGCCGTTGTCGCGACCAGCGACGAA
AGCCCGATGCTGCGCAAGATGGCGCCGCTTTCGGCCGTCACCATTGCCGAATATTTCCGTGACAGGGGCGACAACGTCCT
TCTTATCATCGACAGCGTGACCCGTTTTGCCCATGCGATCCGCGAAGTGGCGGTCGCTTCGGGTGAACCGCCGGTGGCAC
GCGGCTATCCGGCCTCGGTCTTCACCGAATTGCCGCGCCTTCTGGAGCGGGCGGGACCCGGCGCCGAAGGCAGCGGTACC
ATCACCGCCATCGTCTCCATTCTGGTGGACGGCGACAACCACAACGATCCGATTGCCGATTCGACCCGCGGTATTCTCGA
CGGCCACATCGTGCTGGATCGCAGCCTTGCAGAAGAAGGCCGCTATCCTCCGATCAATCCTCTGGCCTCGATCTCGCGTC
TCGCCAAGAAGGCATGGACACCGGATCAGGAAAAGCTGGTGTCGCGTCTGAAAGCGCTGGTGCATCGCTTTGAGGAAACG
CGGGATCTGCGCCTCATCGGCGGTTATCGACCCGGCACCGATCCCGATCTCGACATGGCAGTGAAACAGGTTCCGATCAT
CTATGAAACGCTGAAACAGCTTCCGAATGAACCGGCGGCGCAGGACGCCTACGCCGATCTGGCGACCGCGTTGCGCGGTG
GAGTGCAAAATAATCAGCCACAGGTAAACCCGAGAATGAGAGGCTGA

Protein sequence :
MTMPESTLTVEAISPKLAQLASLAGHYADPEFSVAPGGHVRTIAAGHYTVSGLSRHVRLGEFVAHRSATGIHLGEVVRVE
PDICYVCPIEPGEPIGIHDTVIRKGAFRVAPDDSWCGRTINALGEPIDGKGPLASGTERRPISSNAPPSMTRKRVETPFK
TGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLLSMLAKADAFDKVVIGLVGERGREVREFIEDTMGENMGKSVAVVATSDE
SPMLRKMAPLSAVTIAEYFRDRGDNVLLIIDSVTRFAHAIREVAVASGEPPVARGYPASVFTELPRLLERAGPGAEGSGT
ITAIVSILVDGDNHNDPIADSTRGILDGHIVLDRSLAEEGRYPPINPLASISRLAKKAWTPDQEKLVSRLKALVHRFEET
RDLRLIGGYRPGTDPDLDMAVKQVPIIYETLKQLPNEPAAQDAYADLATALRGGVQNNQPQVNPRMRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 5e-67 45
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 5e-67 45
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-66 45
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 6e-66 45
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-67 45
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 6e-64 45
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-66 44
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-66 43
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-66 43
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 1e-54 43
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 8e-55 43
escN NP_290268.1 hypothetical protein Virulence LEE Protein 4e-61 43
ECs4568 NP_312595.1 EscN Virulence LEE Protein 4e-61 43
escN CAI43874.1 EscN protein Virulence LEE Protein 2e-60 43
escN YP_003236088.1 translocator EscN Virulence LEE Protein 3e-61 43
escN AAC38383.1 EscN Virulence LEE Protein 4e-61 43
escN AAC31513.1 L0034 Virulence LEE Protein 3e-61 43
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 3e-61 43
escN YP_003223475.1 translocator EscN Virulence LEE Protein 2e-60 43
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 1e-52 42
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 2e-52 42
escN CAC81862.1 EscN protein Virulence LEE II Protein 8e-60 42
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 9e-60 42
escN AAK26715.1 EscN Virulence LEE Protein 2e-59 42
escN AAL57542.1 EscN Virulence LEE Protein 2e-59 42
unnamed AAL06369.1 EscN Virulence LEE Protein 5e-61 41
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 1e-47 41
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 1e-47 41
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 2e-53 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_004277808.1 flagellum-specific ATP synthase VFG0192 Protein 7e-65 44
fliI YP_004277808.1 flagellum-specific ATP synthase VFG0730 Protein 3e-61 43
fliI YP_004277808.1 flagellum-specific ATP synthase VFG0812 Protein 2e-61 43
fliI YP_004277808.1 flagellum-specific ATP synthase VFG2144 Protein 2e-69 41