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Name : glcD (AGROH133_04190) Accession : YP_004277911.1 Strain : Genome accession: NC_015183 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : 1.1.3.15 Position : 619241 - 620689 bp Length : 1449 bp Strand : + Note : glycolate oxidase subunit; FAD/FMN-containing dehydrogenases DNA sequence : ATGGAGGAGGGGGCGGTGACGCAGCCGATCAAGTTTCTGGAGCCGCGTGCGGCGGTTTTATCGAGCCGTGACCGCATTAT ATCCGATCTGAAGGATATCCTGGCCGAGGACTGTCTCGTGCACGAGCCGCGTGAGCTCGTGCCTTTCGAGACCGACGCTT TCGTCTCCTACCGCCGCCTGCCGCTGGCCGTCGCCTTGCCGAAGACCACCGAAGAGGTCGCAGCGGTACTGAAATATTGT CACCGTTACGGCATTCCTGTCGTGCCGCGCGGCGCGGGCACCTCGCTTTCCGGCGGCGCCATTCCGCAGGAAGATGCGGT GGTGATCGGCCTTTCGAAGATGTCCGCGATCCTCGAACTCGATTTTTACAATCGCACGGCAAGGGTACAGGCGGGCGTCA CCAATCTCTCCATTTCCGATGCGGCCGGTGCGGAAGGCTTCTTTTATGCGCCGGACCCAAGCTCGCAGCTTGCCTGCACC ATCGGCGGCAATGTCGGCATGAATTCCGGCGGTGCGCACTGCCTGAAATACGGTGTCACCACCAATAATCTGCTCGGCGT AAAAATGGTGCTTGTCGATGGCACGGTGCTGGAGCTGGGCGGCAAGCATCTTGACGCCGCCGGTTACGATCTTCTCGCCC TCATTTGCGGTTCGGAAGGCCAACTCGGCATCGTCACCGAGGCGACGGTCCGGCTCATTGCCAAGCCGGAGGGCGCGCGC CCGGTACTGTTTGGTTTCGAAACTTCCGAAGAAGCTGGCTCCTGCGTAGCCGATATCATCGGCGCGGGCATCATTCCTGT CGCCATCGAATTCATGGACAAGCCGGCAATCGAGATTTGCGAGGCCTTCGCCAAGGCCGGATATCCGCTGGATGTCGGCG CGCTGCTGATTGTCGAGGTCGAAGGCTCGGAGGCGGAAATGGACGCCATGCTGGCCGATATTGTCGCCATTGCGAAAAAA CACGGCGTGAAGACGGTCAGGGAATGCCAGTCGGCCATGGAGGCCGCGGCGATCTGGAAGGGCCGGAAATCCGCTTTCGG CGCAACGGGCCGCATCGCGGACTATATCTGCATGGATGGCACGGTGCCGCTTTCCCAGCTTTCCTATGTGCTGAAAAAAA CAAGCGAAATCACCGACCGCCTCGGCCTTCGCGTTGCTAATGTCTTTCATGCGGGCGATGGCAACATGCATCCGCTGATC CTGTTCAACGCCAACGATCCGGAAGACGCCGCCAGGGCCGAAGAGGCGGGCAATGAAATCCTGAAGCTCTGCGTCGATGC GGGCGGTTGCCTCACCGGCGAACACGGTGTCGGCATCGAAAAACGCGACCTGATGCGGCACCAATATGCCGAGGCTGATC TTGCCCAGCAGATGGCGGTTCGCGCTGCTTTTGACGAGGGTTGGTTGATGAACCCTTCCAAGGTGTTTCCGCTGGAGGGG AGGGGATGA Protein sequence : MEEGAVTQPIKFLEPRAAVLSSRDRIISDLKDILAEDCLVHEPRELVPFETDAFVSYRRLPLAVALPKTTEEVAAVLKYC HRYGIPVVPRGAGTSLSGGAIPQEDAVVIGLSKMSAILELDFYNRTARVQAGVTNLSISDAAGAEGFFYAPDPSSQLACT IGGNVGMNSGGAHCLKYGVTTNNLLGVKMVLVDGTVLELGGKHLDAAGYDLLALICGSEGQLGIVTEATVRLIAKPEGAR PVLFGFETSEEAGSCVADIIGAGIIPVAIEFMDKPAIEICEAFAKAGYPLDVGALLIVEVEGSEAEMDAMLADIVAIAKK HGVKTVRECQSAMEAAAIWKGRKSAFGATGRIADYICMDGTVPLSQLSYVLKKTSEITDRLGLRVANVFHAGDGNMHPLI LFNANDPEDAARAEEAGNEILKLCVDAGGCLTGEHGVGIEKRDLMRHQYAEADLAQQMAVRAAFDEGWLMNPSKVFPLEG RG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 6e-102 | 49 |
