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Name : NAL212_1562 (NAL212_1562) Accession : YP_004294605.1 Strain : Nitrosomonas sp. AL212 Genome accession: NC_015222 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1499815 - 1501869 bp Length : 2055 bp Strand : + Note : KEGG: neu:NE0768 cytochrome c-type biogenesis protein (CcmF); TIGRFAM: Cytochrome c-type biogenesis protein CcmF; PFAM: Cytochrome c assembly protein DNA sequence : ATGATTCCAGAAATTGGTAATTTTTCTTTAATACTTGCTCTCCTACTGGCTACTTTACAAGGAACATTGCCTATTATTGG CGCGGCACGTGGTATTCCTTCCTGGATAGCATTGGCGAGACCTGTAGTTCAGGGGCAATTTGTATTTGTACTGATTGCAT TCTTTTGTTTGGCATATTCTTTTGTCAGTAGCGACTTCTCTGTTTTAAATGTAGCCAATAATTCGAATACAGAATTACCA TTTCATTTTCGATTAGCCGCGACGTGGGGATCTCATGAAGGTTCTTTATTGTTATGGGTTTTGATGCTTGCCAGTTGGTC TGTTGCAGTCAGTGTCTTTAGTAAGCAGTTGCCAGATGATGTTGTTGCAAGAGTACTTGGAGTTTTAGGCCTGGTCAGTA TCGGTTTTTTGGTATTTATGTTATTTACCTCAAATCCATTTGATCGTTTATTACCTGCTGCAGTGGAAGGAAGTGACTTG AATCCTTTGTTGCAAGATTTTGGCATGGTAGTGCATCCGCCTATGCTCTATATGGGGTATGTAGGGTTTTCGGTTGCTTT TGCTTTCGCTATCGCCGCGTTATTGAGCGGGAAGTTGGATGCGACGTGGGCGCGCTGGTCACGTCCATGGACGATTATTG CCTGGGTATTTTTAACAATTGGAATTATGCTCGGTAGCTGGTGGGCCTATTATGAATTAGGCTGGGGCGGCTGGTGGTTT TGGGATCCGGTAGAGAACGCATCTTTTATGCCGTGGCTTGTTGGTACAGCTTTAGTTCATTCGCTGGCTGTTACTGAAAA ACGCGGTAGTTTCAAAAGCTGGACAGTTTTATTGGCAATTAGCACATTCGCGCTGAGTTTGTTGGGAACATTTTTAGTGC GCTCAGGTGTTTTAACTTCTGTTCATGCATTTGCAACCGATCCTGCCCGAGGTGTATTTATCCTTGCTTTTCTTGTGATT GTGATTAGCTGTGCATTATTATTGTTCGCATGGCGTGCGCCAAAAGTTGGCTTAGGAGGCAGATTTGACTTGCTCTCGCG CGAATCAATGTTGCTGGCTAATAATATATTGTTACTGGTCGCAGCGGCAAGTGTATTGTTGGGAACACTTTACCCATTGA TTATTGATGCTCTTGGTTTGGGTAAATTATCGGTAGGCCCTCCATTCTTTGAAGCAGTTTTTGTACCTATCATGACACCG GCGATTTTCTTGATTGGTATTGGGCCTATTTCACGTTGGAAACAGATGAGTTTGCCCGCACTGGCTGTTCGTTTACGCTG GGCGTTTGGAATAAGTGTAGTTTCTGCTCTCATGACACCATTTTTTATGGGCGAATGGAAACCGATGGTTAGCTTTGGTT TACTGCTTGCTTTCTGGATTATTGTGTGTGCATTTGTTAATTTAAAGCATCGTCTGAATAACTCCGGAAAAAGCAGTCTG TTTACTAAACTGACTAAACAGTCAAGAAGCTATTACGGAATGCATTGTGCACATATCGGAGTGGCGGTATTTATTATCGG TGTAACGCTAGTAAGCAGCTATGAAACTGAAAAAGATGTACGTATGGAAATTGGCAGCAAGGTAACGGTTGGTGGCTATG TTTTTCAGTTTAATGGTACCAGTGATGTCGTTGGCCCAAACTATAAAGCTGTGAAAGGTGATATTTCTGTTTTTAAAGAT GATCGATTTATTCGCACTTTATATCCGGAAAAGCGTACTTATAATGCTTCGGGTATGGCAATGACTGAAGCGGCCATCGA TACGGGGTTTTTTCGTGATTTATATGTTGCTTTAGGAGAGCCGTTATCGAATGGTGTCTGGGTGGTTCGTGCTTATCATA AACCGTTTGTGGATTGGATATGGTTTGGGTGTATATTGATGGCAATGGGGGGTATTACCTCAATTACCGATCGGCGTTAT CGTCTTAAGATTACTAAAAAGAAATCTGCTGCTACTAGCGATATTGAATCGGAAAAGCAAACCAAAGGTACGCCGGCAGC AGTTGCATCTGCAACAACCAAGGTTGAATTGGCTACGGAGGCCACAAAGTTATGA Protein sequence : MIPEIGNFSLILALLLATLQGTLPIIGAARGIPSWIALARPVVQGQFVFVLIAFFCLAYSFVSSDFSVLNVANNSNTELP FHFRLAATWGSHEGSLLLWVLMLASWSVAVSVFSKQLPDDVVARVLGVLGLVSIGFLVFMLFTSNPFDRLLPAAVEGSDL NPLLQDFGMVVHPPMLYMGYVGFSVAFAFAIAALLSGKLDATWARWSRPWTIIAWVFLTIGIMLGSWWAYYELGWGGWWF WDPVENASFMPWLVGTALVHSLAVTEKRGSFKSWTVLLAISTFALSLLGTFLVRSGVLTSVHAFATDPARGVFILAFLVI VISCALLLFAWRAPKVGLGGRFDLLSRESMLLANNILLLVAAASVLLGTLYPLIIDALGLGKLSVGPPFFEAVFVPIMTP AIFLIGIGPISRWKQMSLPALAVRLRWAFGISVVSALMTPFFMGEWKPMVSFGLLLAFWIIVCAFVNLKHRLNNSGKSSL FTKLTKQSRSYYGMHCAHIGVAVFIIGVTLVSSYETEKDVRMEIGSKVTVGGYVFQFNGTSDVVGPNYKAVKGDISVFKD DRFIRTLYPEKRTYNASGMAMTEAAIDTGFFRDLYVALGEPLSNGVWVVRAYHKPFVDWIWFGCILMAMGGITSITDRRY RLKITKKKSAATSDIESEKQTKGTPAAVASATTKVELATEATKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 5e-178 | 61 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 6e-133 | 57 |
