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Name : NAL212_1060 (NAL212_1060) Accession : YP_004294138.1 Strain : Nitrosomonas sp. AL212 Genome accession: NC_015222 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 978998 - 981088 bp Length : 2091 bp Strand : + Note : KEGG: nmu:Nmul_A2427 preprotein translocase subunit SecD; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein, bacteria; PFAM: Preprotein translocase, SecD/SecF/SecDF; SecD/SecF/SecDF export membrane protein, GG motif, N-termina DNA sequence : ATGAACCGCTACGCACTTTGGCAGTACCTGATTATTGCGGTTTCACTGCTACTCGGCTTACTTTACACTTTGCCGAATTT TTATGGCGAATCTCCAGCAATACAGATTTCTCCTATACGAATTTCTATAAGCTCTGATACAGCATTGTTGCAACGGGTTG AAGACACATTAAAACAAGCCAATCTTGAGATGAATGGAATTTTTCTTGAGGAAGGCGGCATTAAGGTTCGTTTTGCCGAT ACCGATTTGCAGATGAAAGCGAAAGATTTACTAGAATCCGCGCTCGGCAGCGAATATATCATTGCGTTGAACCTGCTTCC CAATTCTCCGCGATGGCTTACAAATCTGGGTGCCTTGCCAATGTATCTGGGATTGGATCTGCGTGGCGGGGTGCATTTCA TGCTTGCGGTTGATATGGAAGGAGCGCTTGAGAAGTCACTCGATCGTTATAGTATCGATATACGCAGCACATTGCGCGAG AAGAGGATTTCATACACCGGACTTGAAAAGCAAGGCAAGAAACTGGTCATAAAGTTTCGTGATATTGAATCACGCTCAAA GGCAGAAGCGGAATTAAAATCAAATTTTGAGGATTTCACATTAAATATAGAAGATGTCGATAATCGATATCACCTTATTG CCGCGATCAAACCGGAGGTTCAAATACGCATGCAGGATTCTGCCGTAATGCAGAACATTACTACACTGCGTAACCGTGTT AATGAATTAGGTGTCGCCGAGCCTATCATTCAGAAAGCGGGTGCAGATCGCGTGATTGTTCAATTACCGGGTGTGCAAGA TACTGCCAAAGCAAAGGATATTTTGGGACGGACGGCTACGTTGGAAGTTCGTATGGTTGATGACGAGCATGATCTTGATG CGGCTTTACGTGGCAGAGTTCCTGTTGGAACAGAGCTGCACCAGGAGCGTGGCGGTAGTCCCATTCTCGTTAAAAAACAG GTTCTGCTTACTGGTGAACGCATTACCGATGCGCAACCAGGTTTCGATAAGGACAACCAACCGGCAGTACACATCAACCT TGATAATCATGGGTCGCGCATTTTTAAACAATTAACACGTGAGAATGTCGGTAGAAGAATGGCTATTCTGCTGATTGAAA AAAATACAGCGGAAGTCGTAACCGCACCGGTTATTCGTGAAGAAATCGGCGGTGGACGGGTTCAGATCAGTGGACGCATG ACCAGCCTGGAAGCGCGAGATGTTGCACTATTATTACGTGCAGGTGCATTAGCAGCACCCATGGATATTATCGAGGAACG TACTATTGGTCCCAGTTTGGGTGCGGATAATATTGCCCGAGGGTTTAATTCAACCTTATATGGATTTCTCGCTGTTGCCA TTTTCATAATGGTCTATTACACAGCGTTTGGCGTTATTTCTGCTATTGCGCTTGGATTCAACTTGCTGTTACTGGTCGGT TTATTATCGATCATGCAAGCAACATTGACATTGCCTGGAATGGCTGCCCTGGCTTTAACAGTAGGCATGGCAATAGACGC CAATGTGTTGATTAATGAACGCATCAGAGATGAGTTGCGGGCTGGCGCTTCTCCGCAACTGGCGATTCATGCAGGATATG AACGGGCGTTTGGCACCATTCTGGATTCTAATATTACCACCCTGATTGCAGGTATTGCTTTATTTGCATTTGGCTCGGGA CCGGTCAAGGGTTTTGCGGTAGTGTTGTGTCTGGGTATTTTGACGTCCGTGTTTACAGCAGTTTTCGTCTCAAGAGCGAT GGTTAATTTTATGTACGGAAATCTTCGCAAACTCGACAATGTTCCTATCGGAGTGGTATGGATACCGAAGAACGATTCTT CAGTTAATGGAGAAACCGATTTTCTTCCCGAGAACGAGGCTGCTGAAACCACAATTAGCTCAAAATCCAGGCGCAGCGAA CAGATTGATGAGAGCAATGTAAAACCGGGTGCTGTGGGTCAAACATCAGTCATGGTCGAGGACGAAAGCTTGGTAGAAAG TTCAACTAAAGTCGCAACAGTTTCTAATGCTGTTAATAAGGCTAAAAGTAAACGTAAATCAGCCGACACCAAAAAGAACA GACAGCAATAA Protein sequence : MNRYALWQYLIIAVSLLLGLLYTLPNFYGESPAIQISPIRISISSDTALLQRVEDTLKQANLEMNGIFLEEGGIKVRFAD TDLQMKAKDLLESALGSEYIIALNLLPNSPRWLTNLGALPMYLGLDLRGGVHFMLAVDMEGALEKSLDRYSIDIRSTLRE KRISYTGLEKQGKKLVIKFRDIESRSKAEAELKSNFEDFTLNIEDVDNRYHLIAAIKPEVQIRMQDSAVMQNITTLRNRV NELGVAEPIIQKAGADRVIVQLPGVQDTAKAKDILGRTATLEVRMVDDEHDLDAALRGRVPVGTELHQERGGSPILVKKQ VLLTGERITDAQPGFDKDNQPAVHINLDNHGSRIFKQLTRENVGRRMAILLIEKNTAEVVTAPVIREEIGGGRVQISGRM TSLEARDVALLLRAGALAAPMDIIEERTIGPSLGADNIARGFNSTLYGFLAVAIFIMVYYTAFGVISAIALGFNLLLLVG LLSIMQATLTLPGMAALALTVGMAIDANVLINERIRDELRAGASPQLAIHAGYERAFGTILDSNITTLIAGIALFAFGSG PVKGFAVVLCLGILTSVFTAVFVSRAMVNFMYGNLRKLDNVPIGVVWIPKNDSSVNGETDFLPENEAAETTISSKSRRSE QIDESNVKPGAVGQTSVMVEDESLVESSTKVATVSNAVNKAKSKRKSADTKKNRQQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-102 | 43 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-102 | 43 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-102 | 43 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 1e-102 | 43 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 3e-102 | 43 |
