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Name : YE105_C1099 (YE105_C1099) Accession : YP_004297298.1 Strain : Yersinia enterocolitica 105.5R(r) Genome accession: NC_015224 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1315398 - 1316885 bp Length : 1488 bp Strand : + Note : - DNA sequence : ATGAAGCTTGGCCTTGACCTGCGTGGTGGTGTGCACTTCTTGATGGAAGTGGATATGGACACTGCGCTTGGCAAGTTACA AGAGCAAACGATGGATACTCTGCGCAGTGATTTGCGTGAGAAAAATATCCCATATGCGACGGTGCGTAAACTGGATAATT ATGGTGTTGAAGTGCGTTTCCGCGACGATAAAACGCGCGATGACGCTATCAGCTACCTTTCTCCTCGCCACCGTGATCTG GTGATTGGCTCCAATGGTAGCAATACCTTAAAAGCTGTAATGAGTGATGAACGTCTGCGGGAAGCGCGGGAATACGCCGT TCAGCAAAACATTACTATTCTGCGTAACCGGGTTAATCAATTAGGTGTAGCCGAGCCGTTGGTTCAGCGCCAGGGTTCAG ATCGTATTGTCGTTGAGTTGCCGGGTATTCAGGATACTGCACGTGCCAAAGAGATTCTAGGTGCAACTGCAACTCTGGAA TTCCGTTTGGTCAATAGCAATGTTGATGCCTCCGTTGCTGCTTCCGGCCGTGTACCGGGCGATTCTGAAGTCAAAAATAC GCGTGAAGGCCGCCCGGTTGTCTTGTACAAGCGCGTTATCCTGACCGGTGACCATATTACCGACTCCACTTCCAGCACTG ACGAATATAACCAGGCTCAGGTTAATATCTCGCTCGATAGCGCCGGTGGTTCTGCTATGTCTAATTTTACCAAAGACAAT ATCGGCAAGCCGATGGCGACTTTGTTTGTAGAATATAAAGACAGCGGTAAAAAAGATGCTAATGGCCGAGCGGTTCTGGT TAAGCAGGAAGAAGTTATCAACGTCGCGACCATCCAGTCTCGCTTGGGTAACAGTTTCCGCATTACCGGTATCGATAATC CGGCTGAAGCTCGTCAGCTTTCTCTATTGCTGCGTGCTGGTGCATTGATTGCACCTATCCAGATTGTAGAAGAACGAACT ATTGGGCCAACTTTGGGTTCTCAGAATATTACCCAAGGTTTGGAAGCTTGCTTGTGGGGCTTGGCGGTTTCTATCCTGTT TATGGTGGTTTACTACCGTAAATTTGGGGTGATTGCCAGTACTGCGCTGCTGGCGAACCTGGTGTTGATCGTAGGCGTGA TGTCTCTGTTACCGGGGGCGACATTAACCATGCCGGGTATTGCCGGGATAGTGTTGACCCTGGCGGTAGCAGTTGATGCT AACGTTCTGATTAACGAGCGAATAAAAGAAGAGTACAAGAACGGGCGGACGATTCAGCAAGCGATTCATGAGGGGTATAA AGGTGCCTTCTCAAGTATCGTCGATGCGAACGTAACGACACTTATCACAGCGATTATTCTTTATGCTGTGGGTACCGGTT CGATTAAAGGCTTTGCCATTACAACGGCAATCGGTGTTGTAACGTCAATGTTCACCGCAATAGTCGGTACTCGTGCCATC GTCAACCTGCTTTACGGCGGCAAGCGCATTAACAAGCTGTCTATTTGA Protein sequence : MKLGLDLRGGVHFLMEVDMDTALGKLQEQTMDTLRSDLREKNIPYATVRKLDNYGVEVRFRDDKTRDDAISYLSPRHRDL VIGSNGSNTLKAVMSDERLREAREYAVQQNITILRNRVNQLGVAEPLVQRQGSDRIVVELPGIQDTARAKEILGATATLE FRLVNSNVDASVAASGRVPGDSEVKNTREGRPVVLYKRVILTGDHITDSTSSTDEYNQAQVNISLDSAGGSAMSNFTKDN IGKPMATLFVEYKDSGKKDANGRAVLVKQEEVINVATIQSRLGNSFRITGIDNPAEARQLSLLLRAGALIAPIQIVEERT IGPTLGSQNITQGLEACLWGLAVSILFMVVYYRKFGVIASTALLANLVLIVGVMSLLPGATLTMPGIAGIVLTLAVAVDA NVLINERIKEEYKNGRTIQQAIHEGYKGAFSSIVDANVTTLITAIILYAVGTGSIKGFAITTAIGVVTSMFTAIVGTRAI VNLLYGGKRINKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 5e-100 | 51 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 3e-99 | 50 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-99 | 50 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-99 | 50 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-99 | 50 |
