Gene Information

Name : YE105_C2209 (YE105_C2209)
Accession : YP_004298408.1
Strain : Yersinia enterocolitica 105.5R(r)
Genome accession: NC_015224
Putative virulence/resistance : Virulence
Product : putative toxin transport protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : -
Position : 2532002 - 2534122 bp
Length : 2121 bp
Strand : -
Note : -

DNA sequence :
ATGATGAATTCAACCACGACTCAGGTTAATCAACCGTTGGAGGCGCTGGCCCGTGCTGCGGCATGTTTTGATTTGGCTGT
TGAATCTTCACACCTGGCACACAAGGTCGGATTAGCGCCTCAAGATATCGATAATATTGCTCTATGCCGTTGTGCAAATT
GGATTGGTTTGCGGGCCAGGGCAGTTAGTTATTCCTTTTCGCGGCTAGAACATTTGCCGCTTCCTATTTTGTTCAGTCAT
GGCACGCAGTGGTATGTGTTACTGGCACTTAATGAACAGGGTGCAAGCGTATATTTTCCCGTTGATGGTCAGCAAAAACA
GATAAGTCAGCAGGAACTTGCCAGCTTGTGGTGTGGCGAAGCCATATTATTGGCGAAAGCTGAACCGCAAAAACAAAAGA
AAGTCCCCTTTGGCTTTAGCTGGTTTATTCCGGTTATCACTAAATACCGCCATCAGTTGCGTAATATCATTTTGGTTTCA
TTGCTATTGCAGGGCATTTTGCTGGTAACGCCAATGCTATTTGAAACGGTTATCGACAAAGTCCTGGTGAGCCGCGGAAT
GGGCAGCTTAATGGTGCTGGGAATTGCCATGATTGCGCTGGCGATTGTGGAACCCTGCTATACCTTTTTACGCGGGTGGT
TGTTTTCACATTTATCCAGCCGAGTGGGGGCCGAGCTTAACACCGGGCTTTATCGCCATTTAATGGGGTTGCCACTGGGT
TACTTCGCTTCACAACAAACCGGACAAACCATCGCTAAAGTGCGAGAAATGGAGCAAATTCGCAGCTTTCTAACCGGTTC
TGCTTTAACCATGCTGTTGGATTTGGTTTTTGTCAGCACCTTTATCGCCGTGATGTTTTGCTATAGCCAACCACTGACAT
GGATAGTCTTGTTCTCCCTCGTTTGTTATCTGCTGTTTTGGTGGGCTGCGGGCGGAATGTTACGCAAGCGGGTGAAGCGC
CAATATGAAACCAGTGCACAGAATACGGCATTTCTCACCGAAGCTATTAGTGGATTGGAAACAATCAAGACATCGGCCAC
CGAAAACCAGTTTAATCGGAGTTGGCGGCATTCGTTGGCAAATTATGTCCGTGCCTCATTTGCTTGTGCCAGAGCTGCCA
ATATTGCTGAGCAAGGTATCAGTTTAATTAATAAAGTGACTTCGGCGATTTTATTGTGGGTTGGCGTCACGTTGGTATTG
GACGGAGAGCTTAGCCCCGGCCAGTTTATCGCGTTTACGTTATTTTCGGGTTATGTCACTCAACCTATCTTGCGTTTGGC
GCAAATCTGGCAAGATTTTCAGCATACGCAGGTGGCGCTAAAACGCATTGGCACCATTCTGGATTATCCCACTGAACCGG
GTAGCGCTGGGTTGTTATCGAGTTCGAATAGCCCTGGGGGGTTGGCTTTTAAACAGGTACGTTTCCGTTATCGGCCCGAT
ACTGCCGAAGTGATACAAAACCTTAATTTAGATATTGCTGGTGGTGAGTTTGTTGGTATTACCGGTCCATCTGGCTGCGG
AAAGTCAACATTAACCAAGCTGCTCCAACGATTATATACGCCACAACACGGACAAATTCTGGTCGATGGGCAGGATTTGG
CTATTACGGATGCCACCACATTACGCTGTCAGATGAGTGTGGTGTTGCAGGAAAGCATACTATTTTCTGGCTCGATACGT
GACAACATATGCCAGTGTCGGCCAAATGCTGATGATGCTCATGTTGAGCATATTGCCCGATTAGCTGGCGCACATGACTT
TATTGCTGCACTGGCTCAGGGTTATCAAACGCCCGTTGGCGAACGCGGCAGTTTGTTATCGGGTGGGCAGCGGCAGCGAG
TTGCATTGGCGAGAGCACTGATGGCGGATCCCAAAATACTGATTCTTGATGAAGCAACCAGTGCGCTGGATTATGAGTCT
GAGGCGGCGATTATGCGTCAGTTGCCGGAAATCACGCGAAATCGCACGGTAATATGTATTGCTCATCGTTTAAACACCTT
GCGTCAATGTCATCGTATTTTGGTGTTAAAAGAGGGGCAAGTATTAGAGCAGGGTAACCATCAAGATTTACTGGCTCAGT
CCGGTACCTATGCACGTTTGTGGCGATTACAGACCGAGTAA

Protein sequence :
MMNSTTTQVNQPLEALARAAACFDLAVESSHLAHKVGLAPQDIDNIALCRCANWIGLRARAVSYSFSRLEHLPLPILFSH
GTQWYVLLALNEQGASVYFPVDGQQKQISQQELASLWCGEAILLAKAEPQKQKKVPFGFSWFIPVITKYRHQLRNIILVS
LLLQGILLVTPMLFETVIDKVLVSRGMGSLMVLGIAMIALAIVEPCYTFLRGWLFSHLSSRVGAELNTGLYRHLMGLPLG
YFASQQTGQTIAKVREMEQIRSFLTGSALTMLLDLVFVSTFIAVMFCYSQPLTWIVLFSLVCYLLFWWAAGGMLRKRVKR
QYETSAQNTAFLTEAISGLETIKTSATENQFNRSWRHSLANYVRASFACARAANIAEQGISLINKVTSAILLWVGVTLVL
DGELSPGQFIAFTLFSGYVTQPILRLAQIWQDFQHTQVALKRIGTILDYPTEPGSAGLLSSSNSPGGLAFKQVRFRYRPD
TAEVIQNLNLDIAGGEFVGITGPSGCGKSTLTKLLQRLYTPQHGQILVDGQDLAITDATTLRCQMSVVLQESILFSGSIR
DNICQCRPNADDAHVEHIARLAGAHDFIAALAQGYQTPVGERGSLLSGGQRQRVALARALMADPKILILDEATSALDYES
EAAIMRQLPEITRNRTVICIAHRLNTLRQCHRILVLKEGQVLEQGNHQDLLAQSGTYARLWRLQTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 2e-140 44
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 1e-140 44
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 1e-140 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE105_C2209 YP_004298408.1 putative toxin transport protein VFG1269 Protein 6e-136 46
YE105_C2209 YP_004298408.1 putative toxin transport protein VFG0841 Protein 1e-131 45
YE105_C2209 YP_004298408.1 putative toxin transport protein VFG1501 Protein 6e-141 44
YE105_C2209 YP_004298408.1 putative toxin transport protein VFG0907 Protein 7e-141 44
YE105_C2209 YP_004298408.1 putative toxin transport protein VFG1557 Protein 6e-141 44