Gene Information

Name : ccmC (SL003B_0250)
Accession : YP_004301983.1
Strain : Polymorphum gilvum SL003B-26A1
Genome accession: NC_015259
Putative virulence/resistance : Virulence
Product : heme ABC transporter permease
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 252552 - 253316 bp
Length : 765 bp
Strand : -
Note : -

DNA sequence :
ATGGCGATCATCGACCTCGCAAACCCGACCCGCTTCCTGTCCCTGGTGCGCGTGCTGCTGCCTTGGCTGACCGCCCTGTG
CGTGGCCTCTTTCGCGGCCGGCCTCTACATGAGCTTCTTCACCGCGCCGGAGGACTACCAACAGGGCGACACCGTCCGGA
TCATGTACATCCACGTGCCGGCCGCCTGGCTGGCGATGATGTGCTACTCGATCATGACGCTGTCGTCCCTCGGCACGCTG
GTGTGGAAGCACCCGCTCGCCGACGTCTCGGCCAAGGCCGCGGCTCCGCTCGGCGCGGCCTTCACCTTCATGTCGCTGGT
CACCGGCTCGCTGTGGGGCAAGCCGATGTGGGGCACCTACTGGGTGTGGGACGCGCGGCTGACCTCGGTGCTGGTGCTGT
TCATCATGTATCTCGGCCTGATGGCCCTGTGGCGGACGATGGAAGACCCGATCAAGGCCGGCAAGGCGGCGGCGATCCTG
ACCTTGGTCGGCGCGCTCAACCTGCCGATCATCAAGTTCTCGGTCGACTGGTGGAACACGCTGCACCAGCCGGCGAGCGT
CATGCGCATGGACGGGCCGACCATCCACCCGGATATCCTGTGGCCGCTGCTGGTCATGGCCATCGCCTTCACCCTGCTGT
TCGTCGTCCTGCACCTGATGGCCATGCGCAACGAGATCCTGCGCCGGCGGGTGCGGGCCCTGCGCATGCGTGCGGCGGCA
GCCCGCCCGGCGATCGCCAGGGCGACCGTTCAGGCTGCGGAGTAG

Protein sequence :
MAIIDLANPTRFLSLVRVLLPWLTALCVASFAAGLYMSFFTAPEDYQQGDTVRIMYIHVPAAWLAMMCYSIMTLSSLGTL
VWKHPLADVSAKAAAPLGAAFTFMSLVTGSLWGKPMWGTYWVWDARLTSVLVLFIMYLGLMALWRTMEDPIKAGKAAAIL
TLVGALNLPIIKFSVDWWNTLHQPASVMRMDGPTIHPDILWPLLVMAIAFTLLFVVLHLMAMRNEILRRRVRALRMRAAA
ARPAIARATVQAAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 2e-39 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ccmC YP_004301983.1 heme ABC transporter permease VFG1856 Protein 2e-32 44