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Name : SL003B_2907 (SL003B_2907) Accession : YP_004304634.1 Strain : Polymorphum gilvum SL003B-26A1 Genome accession: NC_015259 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis transmembrane protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 3136229 - 3138220 bp Length : 1992 bp Strand : - Note : - DNA sequence : ATGATCGTTGAAGCAGGCCATTTCGCGCTGGTGCTGGCCTTCGTGCTGTCGCTGGCGCAGTCGGTGGTGCCGATCTGGGG CGCGACCACGGGCGACCGCCGGCTGATGGACGTCGCCGCGCCGGTGGCCAACATGATGTTCCTGCTGCTGGCCGTCTCCT TCGGCGCGCTGACCTGGGCCTATCTGGCCTCGGATTTCTCCGTCGCCAACGTGTGGGAGAACTCCCATTCGGCCAAGCCG CTGATCTACAAGATCTCCGGCGTCTGGGGCAACCACGAGGGCTCGATGCTGCTGTGGGTGCTGATCCTGACGCTGTTCGG TGCGCTGGTCGGCCTGTTCGGCACCAACATCCCGGCACCGCTGCGCGCGGCCTCGCTCGGCGTGCAGGGATGGATCACGG CCGCCTTCCTGCTGTTCCTGCTGGCGGCGTCCAATCCCTTTGCGCGCATTGCCCGCCCGCCGCTGGAGGGCAACGACCTC AACCCGATCCTGCAGGACATCGGCCTCGCCATTCACCCGCCGCTGCTCTACCTCGGCTACGTCGGCTTCTCGATCACCTT CTCCTTCGCCGTCGCCGCGCTGATCCTCGGGCGCATCGATGCGGCCTGGGCGCGCTGGGTGCGTCCGTGGACCCTACTGG CCTGGGTGTTCCTCACCCTCGGCATCGCCATGGGCTCCTACTGGGCCTATTACGAACTCGGCTGGGGCGGCTGGTGGTTC TGGGACCCGGTCGAGAACGCCTCGTTCATGCCCTGGCTCGCCGGCACGGCGCTGTTGCATTCGGCCATCGTGATGGAAAA GCGCGAGGCGCTGAAGGTCTGGACCGTGCTGCTGGCGATCTTCACCTTCTCGCTGTCGCTGCTTGGCACCTTCCTCGTGC GCTCCGGAGTGCTGACCAGCGTGCACGCCTTCGCCGTCGATCCGGCACGCGGCGTGTTCATCCTGGCGATCCTGTGCCTG TTCATCGGCGGTTCGCTGGCGCTCTACGCCTGGCGCGCGCCGCTGCTCAAGCAAGGCGGCCTGTTTGCACCGATCAGCCG CGAAGGCGCGCTGGTGCTGAACAACCTGTTCCTGAGCGCGGCCTGCGCCGCCGTCTTCGTCGGTACGCTCTATCCGCTGG CGCTGGAAGCCGTCACCGGCGAGAAGATCTCTGTCGGCGCGCCGTTCTTCAACCTGACCTTCGGTCCGCTGATGGTGCCG CTGCTGATCGCCGTGCCGTTCGGGCCGCTGCTGGCCTGGAAGCGCGGCGACCTTCTGGCGGCGGCGGAGCGGCTCTACGC CGTGTTCGGCGTGGCGATCCTCGCCGCCGTGTTCGTGTTCTGGCTGTGGGGCATGGAGCGCGTGCTGGCTCCGCTCGGCG TCGGCCTGGCGGTCTGGGTGATGGCGGGTGCGGTGGCCGAACTGGTCACGCGGTCGCGGATCACGGAAGTGGGGCTCGGC CGGGGCCTTGTCCGTCTCGCCGGGCTGCCGCGTTCGGCCTTCGGCACCATGCTCGGCCACTTTGGCCTCGGCATGACGGC GCTCGGCATCGTCACCGCGTCGGCCTTCCAGGTCGAGCACGTGCAGACCATGCGGCCGGGCGACATGGTCGAGGTCTCCG GCTATCAGGTCACCTTCGATGGCGCTGCGCCGCGCCAAGGCCCGAACTACACCGAGCAGGTCGGCCACTTCACGGTCCGC TCGGGCGGCATCGAGGTGGCCAAGCTCGACCCGTCCAAGCGCGTCTACACCGCCCGCGGCATGCCGACCACGGAAGCCGC GATCAAGACCTTCGGCTTCTCCCAGCTCTACCTGTCTCTGGGCGAAGGGCGGGAGGACGGCGGCATGGACGTGCGCGTGT ACCACAAGCCGCTGATCACCCTGATCTGGCTCGGCTGCCTGGTGATGTCCTTCGGCGGCATCGTGTCTATCAGCGACCGC CGGCTGCGCGTCGGCGCACCCAAGCCCGCCCGCAGCCGCACGGCCGGCGCGGGCCTGAGCCCGGCGGAATGA Protein sequence : MIVEAGHFALVLAFVLSLAQSVVPIWGATTGDRRLMDVAAPVANMMFLLLAVSFGALTWAYLASDFSVANVWENSHSAKP LIYKISGVWGNHEGSMLLWVLILTLFGALVGLFGTNIPAPLRAASLGVQGWITAAFLLFLLAASNPFARIARPPLEGNDL NPILQDIGLAIHPPLLYLGYVGFSITFSFAVAALILGRIDAAWARWVRPWTLLAWVFLTLGIAMGSYWAYYELGWGGWWF WDPVENASFMPWLAGTALLHSAIVMEKREALKVWTVLLAIFTFSLSLLGTFLVRSGVLTSVHAFAVDPARGVFILAILCL FIGGSLALYAWRAPLLKQGGLFAPISREGALVLNNLFLSAACAAVFVGTLYPLALEAVTGEKISVGAPFFNLTFGPLMVP LLIAVPFGPLLAWKRGDLLAAAERLYAVFGVAILAAVFVFWLWGMERVLAPLGVGLAVWVMAGAVAELVTRSRITEVGLG RGLVRLAGLPRSAFGTMLGHFGLGMTALGIVTASAFQVEHVQTMRPGDMVEVSGYQVTFDGAAPRQGPNYTEQVGHFTVR SGGIEVAKLDPSKRVYTARGMPTTEAAIKTFGFSQLYLSLGEGREDGGMDVRVYHKPLITLIWLGCLVMSFGGIVSISDR RLRVGAPKPARSRTAGAGLSPAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 4e-117 | 49 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 1e-94 | 47 |
