Gene Information

Name : SL003B_3006 (SL003B_3006)
Accession : YP_004304733.1
Strain : Polymorphum gilvum SL003B-26A1
Genome accession: NC_015259
Putative virulence/resistance : Unknown
Product : Malate synthase G
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG2225
EC number : -
Position : 3232777 - 3234939 bp
Length : 2163 bp
Strand : -
Note : -

DNA sequence :
ATGCAGGATCGGGTCGAGGTCGACGGGCTGAAGGTCGCGAGGGAACTCTACGACTTCGTCAACGCGCGCGCCCTGCCGGG
GACCGGCGTCGAGCCGGCGACCTTCTGGAAGGAACTGTCCGCCATCGTGCACGATCTCGCGCCGAAGAACCGCGCCCTGC
TCGCCCGACGCGACGCGTTTCAGGCGAAGATCGATGCCTGGCACCGGGCCCATCCGGGCGTGCCTGACATGGCGGCCTAC
AAGGCTTTCCTGACCGAGATCGGCTACCTGGTACCGGAGGGCGGCGCCTTCACTGTGACCACCGCCAACGTCGATCCGGA
AATCTCCACCGTCGCGGGTCCGCAGCTTGTCGTGCCGGTGATGAACGCCCGTTATGCGCTCAACGCCGCCAACGCCCGCT
GGGGCTCGCTCTACGACGCGCTCTACGGCACCGACGCGATGGGGTCGCTGCCTGCGGGCGGCGGCTTCGATCCGGCGCGC
GGCGCAGAGGTGATCGCTTATGCGCGCAAGCTGCTGGACGAGGTGGCGCCGCTCGCTTCCGGCTCCTGGGCCGACATCAT
CGGCTGTTCCGTTTCCGGCGGCGCGCTGAGCGTCGCGACCGACGGCGGTGCCGTCGCGCTCGCCGACCCGTCCCAGTTCG
CCGGCCATGACGGCGATGCGGCCGCTCCGTCCAAGGTGTTGCTCGCCAGGAACGGCCTGCATCTGGAAATCGTCATCGAC
GCCGACCATCCGATCGGCAGGACCGACAAGGCGCATATCGCCGACGTGATCGTCGAGTCGGCCATGTCCACGATCATGGA
CTGCGAGGATTCAGTCGCCGCCGTCGACGCCGAGGACAAGGTCGTGGTCTACGGCAACTGGCTCGGCCTGATGAAGGGCG
ACCTCGAGGAGACCTTCGAGAAGTCGGGCAAGATGATGACGCGGCGCATGAACGGCGACAGGACGTACACGGCGCCGGAC
GGCTCGCAGCTCACGCTGCACGGACGCTCGCTGCTGCTGGTGCGCAACGTCGGCCACCTGATGACCATCGACGCGGTGCT
GGACCGGGACGGCAACGAGGTGCCGGAAGGCATCCTCGACGGCATGGTTACCGCGCTGATCGCGCTGCACGACATCGGGC
CGAGCGGCCGGCGCGCCAATTCCCGCGCCGGCTCGGTCTATATCGTCAAGCCGAAGATGCACGGGCCCGAGGAGGTCGCC
TTCGCCTGCGAACTGTTCGACCGCATCGAGGACGCACTCGGCATGGCGCGCAACACGCTGAAGATGGGCATCATGGACGA
GGAGCGCCGCACCACGGTCAACCTCAAGGAATGCATCCGCGCGGCGAAGGATCGGGTGTTCTTCATCAACACCGGCTTCC
TGGACCGCACCGGCGACGAGATGCACACGTCGATGGAAGCAGGTCCTATGATCCGCAAGGGCGACATGAAGACGGCCACC
TGGATCGCGGCCTACGAGAACAACAACGTCGACGTCGGCCTGGCCTGCGGCCTGCCGGGCCATGCCCAGATCGGCAAGGG
CATGTGGGCCATGCCCGACCTGATGCACGCGATGCTGGAGCAGAAGCTCGGCCATCCGATGGCCGGTGCCAACACCGCCT
GGGTGCCGTCGCCGACGGCGGCCACGCTGCACGCGCTGCACTACCACAAGGTCAACGTCGCCGGGCGGCAGGCGGACCTT
AAGTCGCGTGCCAAGGCCAGGCTGGAGGACATCCTGTCGATACCGGTCGCGACCCGGCCGAACTGGTCGCCCGAGGACAT
CCAGGCCGAGCTCGACAACAACGCGCAAGGAATTCTCGGCTACGTGGTGCGTTGGGTCGAGCAGGGCGTGGGCTGCTCCA
AGGTGCCGGACATCAACAACATCGGCCTGATGGAGGACCGCGCCACCCTGCGCATTTCCTCGCAGCACATCGCCAACTGG
CTGCGCCATGGCGTCTGCTCGAAGGACCAGGTCATGGAGACCATGAAGCGGATGGCGGCGCTGGTCGACAAGCAGAACGC
CGGCGATCCGAACTACCGGCCGATGTCGGCGGACTACGACGCCTCGGTCGGCTTCCAGGCCGCCTGCGACCTCGTCTTCA
AAGGGTGCGAGCAGCCGAACGGCTACACCGAGCCGGTGTTGCACCGTCGCCGCCTCGAATTTAAGGCGAAGCAGGCGGTC
TGA

Protein sequence :
MQDRVEVDGLKVARELYDFVNARALPGTGVEPATFWKELSAIVHDLAPKNRALLARRDAFQAKIDAWHRAHPGVPDMAAY
KAFLTEIGYLVPEGGAFTVTTANVDPEISTVAGPQLVVPVMNARYALNAANARWGSLYDALYGTDAMGSLPAGGGFDPAR
GAEVIAYARKLLDEVAPLASGSWADIIGCSVSGGALSVATDGGAVALADPSQFAGHDGDAAAPSKVLLARNGLHLEIVID
ADHPIGRTDKAHIADVIVESAMSTIMDCEDSVAAVDAEDKVVVYGNWLGLMKGDLEETFEKSGKMMTRRMNGDRTYTAPD
GSQLTLHGRSLLLVRNVGHLMTIDAVLDRDGNEVPEGILDGMVTALIALHDIGPSGRRANSRAGSVYIVKPKMHGPEEVA
FACELFDRIEDALGMARNTLKMGIMDEERRTTVNLKECIRAAKDRVFFINTGFLDRTGDEMHTSMEAGPMIRKGDMKTAT
WIAAYENNNVDVGLACGLPGHAQIGKGMWAMPDLMHAMLEQKLGHPMAGANTAWVPSPTAATLHALHYHKVNVAGRQADL
KSRAKARLEDILSIPVATRPNWSPEDIQAELDNNAQGILGYVVRWVEQGVGCSKVPDINNIGLMEDRATLRISSQHIANW
LRHGVCSKDQVMETMKRMAALVDKQNAGDPNYRPMSADYDASVGFQAACDLVFKGCEQPNGYTEPVLHRRRLEFKAKQAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 62