Gene Information

Name : Clole_1236 (Clole_1236)
Accession : YP_004308162.1
Strain : Clostridium lentocellum DSM 5427
Genome accession: NC_015275
Putative virulence/resistance : Resistance
Product : phosphonate-transporting ATPase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : 3.6.3.28
Position : 1418344 - 1419066 bp
Length : 723 bp
Strand : +
Note : PFAM: ABC transporter-like; KEGG: cbe:Cbei_4173 ABC transporter related; SMART: ATPase, AAA+ type, core

DNA sequence :
GTGATAAAGATTAGTGGTCTTAATAAATTTTTTGGTCATCATCATGTTTTAAAAAACATTGATTTAGAGGTTAATGAAGG
AGAAAAGCTAGTTATTATTGGCCCTAGTGGTAGTGGGAAAAGTACACTGATTAGGTGTATTAATCATTTAGAAGAACCAA
CTTCAGGGCAAGTAGAAATTGATGGACAGTTATTAACAAGGAAAAACAAAACACAGGTTGTGAGAAACTCCTCAGCCATG
GTATTTCAGCAATTTAACTTATATCCACATATGACAGTGTTAGAAAATCTTACACTTGCACCTATGAAATTACAAAAGAT
GCCTAAAAAAGAGGCAGAGGAAATGGCACTTCAGTATTTAGAAAGAGTAGGCCTTTTGGAGAAAAAGGATGCCTATCCTC
AAAACCTATCAGGAGGACAGCAACAAAGAGTTGCTATTGCAAGGGCGCTTGCTACAAAACAAAGAATCATTTTATTTGAT
GAACCTACTAGTGCTCTGGATCCAGAGATGGTGCAAGAAGTATTAGATGTTATGATTAAGTTATCTGAAGAAAATATTAC
GATGGTTTGTGTAACACATGAAATGGGTTTTGCAAGACAAGTGGCAGATCGCGTCATTTTTATGGATGATGGTTCTATTG
TAGAAAGTGGTTCACCAGAGCATTTCTTTGAAAATCCAGAAAATGAGCGTACCAAACTATTCTTAAGTAAAATATTACGT
TAA

Protein sequence :
MIKISGLNKFFGHHHVLKNIDLEVNEGEKLVIIGPSGSGKSTLIRCINHLEEPTSGQVEIDGQLLTRKNKTQVVRNSSAM
VFQQFNLYPHMTVLENLTLAPMKLQKMPKKEAEEMALQYLERVGLLEKKDAYPQNLSGGQQQRVAIARALATKQRIILFD
EPTSALDPEMVQEVLDVMIKLSEENITMVCVTHEMGFARQVADRVIFMDDGSIVESGSPEHFFENPENERTKLFLSKILR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clole_1236 YP_004308162.1 phosphonate-transporting ATPase NC_012469.1.7686878. Protein 3e-29 43