Gene Information

Name : Clole_4087 (Clole_4087)
Accession : YP_004310961.1
Strain : Clostridium lentocellum DSM 5427
Genome accession: NC_015275
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 4498481 - 4498771 bp
Length : 291 bp
Strand : -
Note : KEGG: cpy:Cphy_2641 microcompartments protein; PFAM: Microcompartment protein, bacteria; SMART: Microcompartment protein, bacteria

DNA sequence : 
ATGGCAAATACAAATGCATTAGGAATGATTGAAACAAAAGGTTTAGTTGGCGCAATTGAAGCAGCTGATGCAATGGTAAA
AGCAGCCAATGTTGCTTTAGTTGGTAAAGAGCAAATTGGAGGTGGCCTTGTAACTGTTATGGTAAGAGGAGATGTGGGTG
CTGTAAAAGCAGCTACAGATGCAGGAGCAGCAGCAGCAGAAAGAGTAGGCGAACTCATCTCTGTGCATGTTATTCCAAGA
CCTCATTCAGAAGTTGACGTTATCTTGCCACATAGTCATGCACAAGCATAA

Protein sequence : 
MANTNALGMIETKGLVGAIEAADAMVKAANVALVGKEQIGGGLVTVMVRGDVGAVKAATDAGAAAAERVGELISVHVIPR
PHSEVDVILPHSHAQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 7e-11 63
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-10 60
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 4e-09 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clole_4087 YP_004310961.1 microcompartments protein VFG1597 Protein 3e-11 63
Clole_4087 YP_004310961.1 microcompartments protein VFG1596 Protein 9e-11 60
Clole_4087 YP_004310961.1 microcompartments protein VFG1598 Protein 1e-09 58