Gene Information

Name : Clole_R0013 (Clole_R0013)
Accession : -
Strain : Clostridium lentocellum DSM 5427
Genome accession: NC_015275
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 46244 - 47755 bp
Length : 1512 bp
Strand : +
Note : RNAmmer 1.2, Lagesen et al., Nucleic acids Res. Apr 22, 2007

DNA sequence :
AGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATGCAAGTCGAACGAAGTGATAGGAGCTTGCTC
CTAGAACTTAGTGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTATGCAGGGGATAACGTTTGGAAACGAACGCTA
ATACCGCATAAACTATCGGTAATCGCATGATTATTATAGTAAAGATTTATCGGCATAGGATGGACCCGCGTTGGATTAGC
TAGTTGGTGAGATAACAGCCCACCAAGGCGACGATCCATAGCCGGCCTGAGAGGGTGAACGGCCACATTGGGACTGAGAC
ACGGCCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGATGCAGCGACGCCGCGTGAA
GGAAGAAGGTCTTCGGATTGTAAACTTCTATCAGCAGGGAAGAAAAAATGACGGTACCTGACTAAGAAGCTCCGGCTAAC
TACGTGCCAGCAGCCGCGGTAATACGTAGGGAGCGAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTAGGCGGTTT
GTTAAGTCAGAAGTGAAATTTAGGGGCTCAACCTCTAAGCTGCTTCTGAAACTGATGAACTAGAGTGTGGGAGAGGAAAG
TGGAATTCCGAGTGTAGCGGTGAAATGCGTAGAGATTCGGAGGAACACCAGTAGCGAAGGCGGCTTTCTGGACCATAACT
GACGCTGAGGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGAATGCTAGGT
GTCGGGGCTTACGGGTCTCGGTGCCGAAGTTAACACATTAAGCATTCCACCTGGGAAGTACGATCGCAAGATTGAAACTC
AAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCTAAACTT
GACATCCCGATGATCGGTCTTTAATCGGACCTTTCCTAGCTTGCTAGGACATTGGTGACAGGTGGTGCATGGTTGTCGTC
AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTATCTTTAGTAGCCAGCATTAAGTTGGGCAC
TCTAGAGAGACTGCCAGGGATAACTTGGAGGAAGGTGGGGATGACGTCAAATCATCATGCCCCTTATGTTTAGGGCTACA
CACGTGCTACAATGGCTGCTACAAAGGGAAGCGATCTCGCGAGAGTCAGCAAACCTCAAAAAAGCAGTCCCAGTTCGGAT
TGTAGTCTGCAACTCGACTACATGAAGTTGGAATCGCTAGTAATCGCGAATCAGAATGTCGCGGTGAATACGTTCCCGGG
TCTTGTACACACCGCCCGTCACACCATGGGAGTTGGGGGGGCCCAACGCCGGTGACCCAACCCTTCGGGGAGGGAGCCGT
CTAAGGCAAAACCAATAACTGGGGTGAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATCACCT

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-155 86.7
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-155 86.7
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-155 86.7
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-155 86.7
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-154 86.6
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-154 86.6