Gene Information

Name : Clole_R0002 (Clole_R0002)
Accession : -
Strain : Clostridium lentocellum DSM 5427
Genome accession: NC_015275
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 10458 - 11969 bp
Length : 1512 bp
Strand : +
Note : RNAmmer 1.2, Lagesen et al., Nucleic acids Res. Apr 22, 2007

DNA sequence :
AGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATGCAAGTCGAACGAACTGCGAGGAGCTTGCTC
CTCAAGGTTAGTGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTATGCAGGGGGATAACGTTTGGAAACGAACGCT
AATACCGCATAAACTATCGGTAATCGCATGATTATTATAGTAAAGATTTATCGGCATAGGATGGACCCGCGTTGGATTAG
CTAGTTGGTGAGATAACAGCCCACCAAGGCGACGATCCATAGCCGGCCTGAGAGGGTGAACGGCCACATTGGGACTGAGA
CACGGCCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGATGCAGCGACGCCGCGTGA
AGGAAGAAGGTCTTCGGATTGTAAACTTCTATCAGCAGGGAAGAAAAAATGACGGTACCTGACTAAGAAGCTCCGGCTAA
CTACGTGCCAGCAGCCGCGGTAATACGTAGGGAGCGAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTAGGCGGTT
TGTTAAGTCAGAAGTGAAATTTAGGGGCTCAACCTCTAAGCTGCTTCTGAAACTGATGAACTAGAGTGTGGGAGAGGAAA
GTGGAATTCCGAGTGTAGCGGTGAAATGCGTAGAGATTCGGAGGAACACCAGTAGCGAAGGCGGCTTTCTGGACCATAAC
TGACGCTGAGGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGAATGCTAGG
TGTCGGGGCTTACGGGTCTCGGTGCCGAAGTTAACACATTAAGCATTCCACCTGGGAAGTACGATCGCAAGATTGAAACT
CAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCTAAACT
TGACATCCCGATGACCGGTCTTTAATCGGACCTTTCCTAGCTTGCTAGGACATTGGTGACAGGTGGTGCATGGTTGTCGT
CAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTATCTTTAGTAGCCAGCATTAAGTTGGGCA
CTCTAGAGAGACTGCCAGGGATAACTTGGAGGAAGGTGGGGATGACGTCAAATCATCATGCCCCTTATGTTTAGGGCTAC
ACACGTGCTACAATGGCTGCTACAAAGGGAAGCGATCTCGCGAGAGTCAGCAAACCTCAAAAAAGCAGTCCCAGTTCGGA
TTGTAGTCTGCAACTCGACTACATGAAGTTGGAATCGCTAGTAATCGCGAATCAGAATGTCGCGGTGAATACGTTCCCGG
GTCTTGTACACACCGCCCGTCACACCATGGGAGTTGGGGGGCCCAACGCCGGTGACCCAACCCTTCGGGGAGGGAGCCGT
CTAAGGCAAAACCAATAACTGGGGTGAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATCACCT

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-155 87.3
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-155 87.3
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-155 87.1
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-155 87.1
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-154 87
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-154 87