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Name : Marme_1063 (Marme_1063) Accession : YP_004312174.1 Strain : Marinomonas mediterranea MMB-1 Genome accession: NC_015276 Putative virulence/resistance : Virulence Product : type III secretion outer membrane pore, YscC/HrcC family Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 1195143 - 1197284 bp Length : 2142 bp Strand : - Note : KEGG: ddc:Dd586_1906 type III secretion outer membrane pore, YscC/HrcC family; TIGRFAM: type III secretion system outer membrane pore YscC/HrcC; PFAM: type II/III secretion system; NolW-like DNA sequence : ATGACGTACCGTCAAGCTCTTCGTTTGCTCGAAACAGATAGTCGTTCTATTCAGCGTTTAACTGGGCTTCTAAGACTACT TTTCAAAGCCTGCTTACTGTCTTTAATGTTTTGCTCCTATTCGTTTGCAGCGTTTCCACCTGAGTGGAAAAAAACGGCAT TTGCATTTGAAGCAAACCAAACTTCACTGCGCAAAACACTGGCTTCTTTTTGCAATACATTTGGTGTCAGCTTGTCCATC AGCAACAAACTGTCTGGCACCGTCGATGGAAAACTCAAATCTAATTCAGCCCAAGATTTTCTAAACCGCCTTGCGATTGA ACATAAGTTTCTCTGGTTCGTATACAACGGCACTTTGTATGTCAGCCCACTAAAAGAACAAACCTCAGAGCTGCTCGATG TCTCAGAGGACGCAGTACCCGATTTAAAAAATGCGCTGACTCAGATCGGCTTACTTGACGATAGATTTGGGTGGGGGGAA CTTCCCGATGAAGGTACCGTTATTGTTTCGGGCCCTAAACGCTATGTTAAGTTTGTAAGATCTCTTTCGCGTAAGAAGAA AAAGGGAGACGAAAAAAAGGAAGTCATGGTCTTCCCTTTAAAATACGCACTCGCTGATGATCGATCCATAAATTATCGCA ACAAGTCCATTAACATTCCCGGCGTCGCTTCAATGTTAAGTAATCTACTCGGTGGCGGCAAAAAAGCACCACTGGCGATC GATACGATGGACTTTAAGTCGCCTGCTCAAAGTATGGAGGCATTCAGCGCAATGCAAGAAAACTCGATCAGCCGTATCAA TAACCGAATTGCAGATCGATATGCGACTCCCAGCGAAATCAATGCAAAACTCAGCGACAACAGTAAGGTTAACTCGACAA TTAGCGCCGATACGCGAAACAACGCCATACTCATTAGAGACGATTACGAAAGAAAAGAAATGTACGAAGATCTAATCGCT CAACTCGACCAGCCTAGACATGTCATTGAAATTGACGCCATTATCTTAGACATCGACCGAGAAAAACTATCTGAGCTCGG GTTTAACTGGCAAGGGGGCTCTGGTAATACCGAAGCAAAAATTAACACTTCAGGCGCGGACCCATTTCTTAAGAGCGGCT CCTCTGCGACCGTCACCATTCAGGACTTTGATCATTTCTTTGCCCAAATTCGTGCTTTGGAAACAGACGGAGACGCATCA CTCGTCGCGAACCCATCTATTCTGACAATCGAAAATCAGCCCGCAATAATCGATTTTAATAACACCGCATTCATTAAATC GACCGGTGAACGCGTCGCAAACGTGTCTGAAATTACCGCAGGGACAAGTTTACAAGTCCTACCAAGGCTAATTGACTCAG AAGCAGAACGCGTCATACAGCTTTTCTTAGACATTGAAGACGGCGATATTGAATCGAATTCCGGTGCCGATACCCCTTCA GTAAGCAAAGGCAGTATCAGTACTCAGGCAGTCATTAAAACGGAAAGGTCTCTTGTTATAGGCGGTTTTAAAGTTGAACA AAACACACAAAGAGAAAGCAAAGTTCCGCTATTGGGCGATCTACCTGGGATAGGAAAACTCTTTAGCTACACCAGCAAAG CACACTCGAAACGCGAAAGACTTTTTATCATAACCCCAAGACTGGTCGGCAATGAAAGTAACCCTCTACAATACGTTTCT AAAGGAGATCAAGAAATGCTGGCCGAAGCGTTAGAATCTCAAAAAGACAAACATGCTCGTGATTTTCTCAAGATTACTCG AGCACAAGTCGGCCGAGCCTTTGAAGAGCTGATCAATCTATACATTCCCAACGGTTTTTCACTGCAAACCTCTGCGCCAT ATGGTATCGAATATTACTGTAGCCCAAGTGAGCACTTCAAAATCAATACAAAGAAGCTCCAGTGGTATAACAGCGAAGAT TACTCCATTTTAGTGGGAAAGATCCGCAACGAAAGCCCACATCCTAATCGATTTGACGAATCTTCCTGCTCCCATAAAGA CACCATTGCCGTGTCTGTTCGCCCAGATACGATGCTCAAACCGTGGGAATCTGTCGAGGTATTACTCGCCGTCAGATTGC CAAATAAAAACAAGAAACAACGTAATTCCTTGATTTCCAGCAATCATGACATTCATCACTGA Protein sequence : MTYRQALRLLETDSRSIQRLTGLLRLLFKACLLSLMFCSYSFAAFPPEWKKTAFAFEANQTSLRKTLASFCNTFGVSLSI SNKLSGTVDGKLKSNSAQDFLNRLAIEHKFLWFVYNGTLYVSPLKEQTSELLDVSEDAVPDLKNALTQIGLLDDRFGWGE LPDEGTVIVSGPKRYVKFVRSLSRKKKKGDEKKEVMVFPLKYALADDRSINYRNKSINIPGVASMLSNLLGGGKKAPLAI DTMDFKSPAQSMEAFSAMQENSISRINNRIADRYATPSEINAKLSDNSKVNSTISADTRNNAILIRDDYERKEMYEDLIA QLDQPRHVIEIDAIILDIDREKLSELGFNWQGGSGNTEAKINTSGADPFLKSGSSATVTIQDFDHFFAQIRALETDGDAS LVANPSILTIENQPAIIDFNNTAFIKSTGERVANVSEITAGTSLQVLPRLIDSEAERVIQLFLDIEDGDIESNSGADTPS VSKGSISTQAVIKTERSLVIGGFKVEQNTQRESKVPLLGDLPGIGKLFSYTSKAHSKRERLFIITPRLVGNESNPLQYVS KGDQEMLAEALESQKDKHARDFLKITRAQVGRAFEELINLYIPNGFSLQTSAPYGIEYYCSPSEHFKINTKKLQWYNSED YSILVGKIRNESPHPNRFDESSCSHKDTIAVSVRPDTMLKPWESVEVLLAVRLPNKNKKQRNSLISSNHDIHH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcC | AAT96354.1 | HrcC | Virulence | S-PAI | Protein | 2e-142 | 46 |
| hrcC | AAT96274.1 | HrcC | Virulence | S-PAI | Protein | 3e-142 | 46 |
| hrcC | AAT96315.1 | HrcC | Virulence | S-PAI | Protein | 3e-142 | 46 |
| hrcC | ABA47303.1 | HrcC | Virulence | S-PAI | Protein | 2e-144 | 45 |
| hrcC | AAB49179.1 | HrcC | Virulence | Hrp PAI | Protein | 1e-135 | 43 |
| hrcC | AAB05085.2 | HrcC | Virulence | Hrp PAI | Protein | 1e-124 | 42 |
| hrcC | AAT96206.1 | HrcC | Virulence | T-PAI | Protein | 3e-124 | 41 |
| hrcC | NP_791216.2 | outer-membrane type III secretion protein HrcC | Virulence | Hrp PAI | Protein | 4e-125 | 41 |
| hrcC | AAC34756.1 | HrcC | Virulence | Hrp PAI | Protein | 1e-118 | 41 |
