Gene Information

Name : Marme_1432 (Marme_1432)
Accession : YP_004312535.1
Strain : Marinomonas mediterranea MMB-1
Genome accession: NC_015276
Putative virulence/resistance : Virulence
Product : ABC transporter substrate-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4594
EC number : -
Position : 1600710 - 1601624 bp
Length : 915 bp
Strand : +
Note : PFAM: Periplasmic binding protein; KEGG: mmw:Mmwyl1_0693 periplasmic-binding protein

DNA sequence : 
ATGATTCGAATATTGTTGAACTTTTCTTTGTTTTTTATGGCGATGACTGCACTAAATACATGGGCGGTGACGGTTCAGGA
CAGCAAAGGGGCGTTTTCAATTGACTATGTACCAAAGCGGATTGTCGTGCTGGAGTTTTCTTTTGCCGATGCACTTGCGA
TTGTGGATGTTAAACCGGTTGGCGTCGCGGATGACAAAGACCCTGTGCGATTGTTGCCGGATATCCGAGCAGCGTTTGGA
AGTTGGCAGTCAGTGGGAACACGTTCTCAACCCAGTTTGGAAGTGATCTCTGAGTTAAAGCCTGATCTCATTATTGCGGA
TATTTATCGGCATGAGGGTGTGTATTCTGAACTTCGAAAAATAGCGCCTACGTTAATGTTGCCCTCTAAGCGCCAGCCCT
ATGGTGAGTTGCTTAAAGCAACGGCGATCATTGGCAATGTGATTGGTAAAGATCAAAAAATGACAGCACGGTTACGTGAG
CATGAACGTCTGATGAGTGCCTATAAGCAGCAACTTCCTCAAGGCATGGAAGTTCAAGTTGGTGTGGCGCGCGATGACGC
GTTGTTCCTTCATTCAAGTGATTCGTACACGGGCGGGATTATCGATCGTTTAGGTCTTAAGTTCGCTAAGAGTATTAAAG
ACGATACAGCGCCTCGCCAAGCAAGCATGGAACAATTGTTGTTGATTAACCCTGAGAATCTGATTATCGGTGAGTATGTT
AAACCCAGTATATTGGGTAAATGGCAGCATGAGCCGTTATGGTCGCTTTTGAAGTGCGTTCAAAATCATCGTATTTTCGG
TGTCGATGCCATGCTTTGGGGTAAAAACAGAGGCGTGTTGGCATCGGAGAAAATGGCGGCTGACCTCGTATCCTATCTCG
GGATTGATGCAAAATCGCGGCTTGTATCTCAATAA

Protein sequence : 
MIRILLNFSLFFMAMTALNTWAVTVQDSKGAFSIDYVPKRIVVLEFSFADALAIVDVKPVGVADDKDPVRLLPDIRAAFG
SWQSVGTRSQPSLEVISELKPDLIIADIYRHEGVYSELRKIAPTLMLPSKRQPYGELLKATAIIGNVIGKDQKMTARLRE
HERLMSAYKQQLPQGMEVQVGVARDDALFLHSSDSYTGGIIDRLGLKFAKSIKDDTAPRQASMEQLLLINPENLIIGEYV
KPSILGKWQHEPLWSLLKCVQNHRIFGVDAMLWGKNRGVLASEKMAADLVSYLGIDAKSRLVSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecB AAL08454.1 FecB Virulence SRL Protein 1e-63 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Marme_1432 YP_004312535.1 ABC transporter substrate-binding protein VFG1045 Protein 6e-64 47