Gene Information

Name : Marme_R0088 (Marme_R0088)
Accession : -
Strain : Marinomonas mediterranea MMB-1
Genome accession: NC_015276
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3960038 - 3961564 bp
Length : 1527 bp
Strand : -
Note : RNAmmer 1.2, Lagesen et al., Nucleic acids Res. Apr 22, 2007

DNA sequence :
AGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATGCAAGTCGAGCGGAAACGATGATAGCTTGCT
ATCAGGCGTCGAGCGGCGGACGGGTGAGTAACGCGTAGGAATCTGCCTAGTAGAGGGGGACAACATGTGGAAACGCATGC
TAATACCGCATACGCCCTTTTGGGGAAAGGAGGGGATCTTCGGACCTTCCGCTATTAGATGAGCCTGCGTGAGATTAGCT
AGTTGGTGGGGTAAAGGCCTACCAAGGCGACGATCTCTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACA
CGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCCATGCCGCGTGTGT
GAAGAAGGCCTTAGGGTTGTAAAGCACTTTCAGAAGTGAGGAAGGGTGCTTGATTAATACTCAAGTACTTTGACGTTAGC
TTCAGAAGAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGC
GTAAAGCGCGCGTAGGTGGTTTGTTAAGTCAGATGTGAAAGCCCAGGGCTCAACCTTGGAATTGCACCTGATACTGGCAG
GCTAGAGTACGGTAGAGGGATGTGGAATTTCCTGTGTAGCGGTGAAATGCGTAGATATAGGAAGGAACATCAGTGGCGAA
GGCGACATCCTGGACTGATACTGACACTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACG
CCGTAAACGATGTCTACTAGCCGTTGGTCGATTTTAGATTAGTGGCGCAGCTAACGCGATAAGTAGACCGCCTGGGGAGT
ACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACG
CGAAGAACCTTACCTACTCTTGACATCCAGAGAACTTAGCAGAGATGCTTTGGTGCCTTCGGGAACTCTGAGACAGGTGC
TGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGTAACGAGCGCAACCCTTATCCTTATTTGCTAG
CAGGTGATGCTGAGAACTCTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCCC
TTACGAGTAGGGCTACACACGTGCTACAATGGCGCATACAGAGGGCGGCGAACTTGCGAAAGTAAGCAAATCCCAAAAAG
TGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGGATCAGAATGCCACG
GTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTTGATTGCTCCAGAAGTAGCTAGCTTAACCT
TAGGGATGGCGGTTACCACGGAGTGGTCAATGACTGGGGTGAAGTCGTAACAAGGTAGCCCTAGGGGAACCTGGGGCTGG
ATCACCT

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-165 90.3
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-165 90.3
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-275 88.9
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-275 88.9
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-275 88.8
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-275 88.8