Gene Information

Name : Marme_0887 (Marme_0887)
Accession : YP_004311998.1
Strain : Marinomonas mediterranea MMB-1
Genome accession: NC_015276
Putative virulence/resistance : Virulence
Product : iron-chelate-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.34
Position : 970098 - 970922 bp
Length : 825 bp
Strand : -
Note : PFAM: ABC transporter-like; KEGG: mmw:Mmwyl1_2061 ABC transporter-like protein; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGACACTTGCTTCTTCTCATCGTTCATCGAAGGGTTTGCCTTCGTCCAGTTTAAGCACCGAACACCTAAAGCTTGCGCA
CGGCGCTCGCGATATTGTGCATGATCTCAGCGTTCAATTCCCTGAAGGTAAAGTAACCTCCATTGTAGGACCAAACGGCT
GCGGAAAATCAACTCTCTTAAATGGTCTTGCCCGTATACACAAACCGTCAACAGGTGTTGTCAAAATCGATGGCAAAGAC
GTACAGTCGATCGCCTCTAAAAAAGTCGCTCAAAAGTTAGCACTATTGCCACAAGAAACCCTAGCGCCAGATGGTATTAC
GGTAAAGGAACTCATTCGATTTGGACGACATCCTCACCAAGGGTTGTTAAAGCAGTGGGGGATGAATGACACAGATGCCA
TTCAATTTGCTCTTAATGCGGCGAATTTAAGTGAGCTTGCAGAACGCCCACTGGACACACTTTCTGGCGGGCAACGCCAA
CGTGCCTGGATCGCGATGTGTATTGCTCAAGAAACCCCTTTGTTGCTTTTAGACGAGCCTACTTCCGCTCTGGACTTAGG
GCATCAGATAGAAGTATTTGACCTAATTAGAGACTTATCAGCTGAAGGAAAAAGTGTTGTCATGGTGGTTCATGATATCA
CTATGGCCGCCCGATATTCTGATCACCTAATCGCCATGAAAGACGGAAACATCATCGCAACGGGCAGCCCTAAAAGTGTC
ATTACACAGCCTCTTTTAAAAGAGCTGTATGGCATTCAATGTGATTTATTTGAAGACCCTAAGACAGGAACGCCTGTTTT
GCTTAATGTGCAACGAGCAAGTTAG

Protein sequence : 
MTLASSHRSSKGLPSSSLSTEHLKLAHGARDIVHDLSVQFPEGKVTSIVGPNGCGKSTLLNGLARIHKPSTGVVKIDGKD
VQSIASKKVAQKLALLPQETLAPDGITVKELIRFGRHPHQGLLKQWGMNDTDAIQFALNAANLSELAERPLDTLSGGQRQ
RAWIAMCIAQETPLLLLDEPTSALDLGHQIEVFDLIRDLSAEGKSVVMVVHDITMAARYSDHLIAMKDGNIIATGSPKSV
ITQPLLKELYGIQCDLFEDPKTGTPVLLNVQRAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-50 50
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-50 50
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-50 50
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-50 50
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-56 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-46 43
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 8e-50 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Marme_0887 YP_004311998.1 iron-chelate-transporting ATPase BAC0164 Protein 5e-50 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Marme_0887 YP_004311998.1 iron-chelate-transporting ATPase VFG0925 Protein 3e-56 47
Marme_0887 YP_004311998.1 iron-chelate-transporting ATPase VFG1042 Protein 5e-50 42