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Name : Sph21_2406 (Sph21_2406) Accession : YP_004317630.1 Strain : Sphingobacterium sp. 21 Genome accession: NC_015277 Putative virulence/resistance : Unknown Product : DNA-directed RNA polymerase subunit beta Function : - COG functional category : K : Transcription COG ID : COG0085 EC number : - Position : 2970545 - 2974354 bp Length : 3810 bp Strand : + Note : TIGRFAM: DNA-directed RNA polymerase subunit beta, bacterial-type; HAMAP: DNA-directed RNA polymerase subunit beta, bacterial-type; KEGG: phe:Phep_0849 DNA-directed RNA polymerase, beta subunit; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA DNA sequence : TTGGCAAACAAAGATATTCGTAACGAAAGAGTAAACTTTGCAACCAGCAAAAGAGTCATCGACTATCCCGACTTTCTGGA TGTGCAATTGCAGTCTTTCAAGGAGTTTTTCCAATTGGAAACAACTTCTGATAACCGCCACCAGGAAGGGCTGTTCAAAG TTTTTTCTGAAAACTTCCCTATTTCTGATTCAAGAAACATTTTTGTGCTTGAATTTTTGGATTATTTCATCGATCCGCCA CGTTATGATATTCAGGAATGTATCGAACGCGGCTTAACTTACAGCGTTCCGCTAAAAGCTAAGTTACGTTTATCATGTAA TGATGAAGAACACGAAGATTTCGAAACCATAGTACAAGATGTGTATTTGGGAACTATCCCTTATATGACACCCAAAGGTA CTTTCGTTATCAATGGCGCAGAGCGGGTAATCGTATCGCAACTTCACCGTTCGCCCGGTGTATTCTTTGGCCAAAGCCGC CATACCAATGGCACCAAACTATACTCTGCGAGGGTGATTCCTTTCAAAGGGTCTTGGATCGAATTTGCTACTGATGTTAA TAATGTCATGTACGCTTATATCGACCGTAAAAAGAAATTCCCGGTAACGACTCTTTTGCGTGCTATTGGTTATGACTCGG ATAAAGATATCCTTGAGTTATTCGAATTGGCCGACGAAGTCAAAGTTAGCAAATCCGGCTTGAAGAAATTAGTTGGCCGT AAATTGGCTGCTAGAGTTCTGAAAAGATGGGTTGAAGACTTTGTAGATGAAGATACCGGAGAAGTTGTATCGATTGATCG TAACGAAATTATCCTGGAACGTGAAACGATTCTGGAAGACGATCATATCGACATGATTATAGATGCCGGTGTTAAGTCTA TCATTCTCACTAAAGAAGATAGCTCGAATAACGCTGATTATTCTATCATCTATAACACTTTACAGAAAGATACTTCCAAC TCAGAGAAAGAAGCGGTAGAGCACATTTACCGTCAGTTAAGAAATGCGGAACCACCTGATGAAGAAACAGCTCGTGGTAT TATTGAGCGCTTATTCTTCTCTGATAAACGATATGACTTGGGTGATGTGGGACGTTACCGCATTAACCGTAAATTGCAAT TGGATACGCCTGATGAGATCAAAGTATTAACGAAGCAAGATATCATTGCCATTGTTAAGTACTTGATAAATCTGATCAAT TCGAAGGCGGAAGTGGATGATATTGATCACTTGTCTAATCGACGTGTGCGCACCGTAGGCGAGCAGTTATATGCCCAGTT TGGGGTAGGACTTTCTCGTATGGCACGTACAATTCGCGAGCGAATGAATATTCGAGATAACGAGGTGTTTACTCCAACTG ATTTGATCAATGCACGTACTTTATCGTCTGTTATCAATTCATTCTTCGGAACCAACCAGTTATCGCAGTTTATGGATCAA ACCAATCCATTAGCTGAAATCACACATAAGCGTCGTCTTTCTGCCCTCGGACCGGGGGGGCTTTCGCGAGAGCGTGCCGG TTTTGAGGTTCGTGACGTTCACTATACGCACTACGGCCGACTATGTACGATTGAAACACCGGAAGGTCCGAACATCGGTT TGATTTCTTCCTTATGTGTACACGCAAAAATCAATAACCTCGGTTTTATCGAAACTCCTTATCGAAAAGTTCAAGATGGT AGGGTAGTGGTGGAAGAGCCCGTCGTTTATTTATCGGCAGAGGACGAAGATGGCAAAACCATCGCACAGGCCAATGCAGA ATATGATGAAAAAGGTAATTTCACTACACCGAAAGTGAAAGCCCGCTTCGAAGGTGACTTCCCAATCATCGAACCGGAAC GTTTAGATTTAATGGACATTGCACCGAACCAAATTACTTCGATTGCAGCTTCATTGATTCCGTTCTTGGAACACGACGAT GCGAACCGTGCATTAATGGGATCAAACATGCAACGTCAAGCAGTTCCATTATTGCGTCCACAAGCGCCTATTGTGGGTAC TGGATTGGAAGGCCGTGTAGCGAGTGACTCCCGTACCTTAATTAATGCGGAAGGCAACGGAGTGGTTGAGTACGTAGATG CAAACGAGATAAAAATTCGCTATGATCGGAACGAAGATGAGAAATTAGTTTCTTTCGACGATGATATTAAAACATATCGC TTAATCAAGTTCAAGAAAACAAACCAGAGCACCTGTATTAACTTGAAGCCTATTGTTCGTAAAGGACAACGTGTGGTTGA AGGACAAGTGTTATGCGAGGGCTATGCGACCGAAAACGGTGAACTCGCTTTGGGGCGTAACCTGAAAGTTGCTTTCATGC CATGGCAAGGATATAACTTCGAGGATGCGATCGTTATTTCTGAACGAGTGGTAAGCCAAGATATATTCACTTCTTTACAT ATCGAAGAATTTGAATTGGAGGTGCGTGATACTAAACGCGGGGAAGAAGAGCTTACTTCTGATATTCCCAACGTTTCTGA AGAAGCAACCAAAGATTTAGATGAAAACGGTATTATCCGTATTGGGGCAGAAGTGCGCGAAGGAGATATCCTGATTGGTA AAATTACACCTAAGGGTGAATCCGATCCTTCTCCCGAAGAAAAGCTCTTACGTGCAATCTTTGGTGATAAAGCAGGCGAT GTAAAAGATGCATCTTTAAAAACACCTCCGTCAATCCGTGGGGTGGTAATTGATACAAAGCTCTTTTCGCGTGCTAAAAA AGCTGACAAGAAAGAGGAAAAAGCTGCTTTGGAACGTTTGGATCTTAATCATGAGCGTGCCGTTCGTCAATTAAGAGAAC GCCTGATCGATAAATTATTTGCTATTGTAAATGGCAAAACATCACAAGGTGTGTATAACGTATACAAAGAGCTTTTGATT CCTAAAGGAGCTAAATTTACGCAGAAGATGTTGGCTGAACTTGACTTTGCTAATATCAACCCTTCTAAATGGACCACAGA CGACGACAAGAACGAGCTGGTAAAACAGGCTTTACACTTCTATAATATCAAATTGAATGAGGAGCTTGGAGCTTATCGTC GTGATAAATTTGCCATTACAGTAGGTGATGAACTACCATCCGGTATTGTGCAGATGGCTAAAGTTTACGTCGCGAAGAAA CGCAAGCTTAAAGTAGGTGATAAGATGGCGGGTCGTCACGGAAATAAGGGTATCGTAGCGCGTATTGTACGTGATGAGGA TATGCCTTTCTTAGAAGACGGAACACCTGTAGATATTGTATTAAACCCACTTGGGGTACCTTCTCGTATGAACCTTGGAC AGATTTATGAAACCGTTCTTGGTTGGGCAGGACAAAAACTAGGTGTGAAGTTTGCAACACCGATATTTGATGGAGCTTCC ACTGAAGAAGTGGAGGAGTGGGTCGCTAAAGCCGGTTTACCTGCTTCCGGAAGAACCTATTTATATAATGGTTTAACGGG TGAGCGATTTGACCAGCCAACTACTGTTGGTGTAATTTACATGCTTAAATTAGGTCACATGGTAGACGACAAGATGCACG CACGTTCTATCGGACCATACTCCCTTATTACGCAGCAACCGCTTGGTGGTAAAGCGCAATTTGGTGGCCAACGTTTTGGT GAGATGGAGGTATGGGCGCTGGAAGCATTTGGTGCATCCAACATTCTACAAGAGATTCTTACTGTTAAGTCAGATGATGT TATCGGTAGAGCCAAGACCTACGAAGCAATCGTTAAAGGCGATAATTTGCCTACGCCATCTGTACCTGAATCATTCAATG TATTGGTACATGAGCTTCGCGGCTTAGGTTTAGATATCACGTTAGAATAG Protein sequence : MANKDIRNERVNFATSKRVIDYPDFLDVQLQSFKEFFQLETTSDNRHQEGLFKVFSENFPISDSRNIFVLEFLDYFIDPP RYDIQECIERGLTYSVPLKAKLRLSCNDEEHEDFETIVQDVYLGTIPYMTPKGTFVINGAERVIVSQLHRSPGVFFGQSR HTNGTKLYSARVIPFKGSWIEFATDVNNVMYAYIDRKKKFPVTTLLRAIGYDSDKDILELFELADEVKVSKSGLKKLVGR KLAARVLKRWVEDFVDEDTGEVVSIDRNEIILERETILEDDHIDMIIDAGVKSIILTKEDSSNNADYSIIYNTLQKDTSN SEKEAVEHIYRQLRNAEPPDEETARGIIERLFFSDKRYDLGDVGRYRINRKLQLDTPDEIKVLTKQDIIAIVKYLINLIN SKAEVDDIDHLSNRRVRTVGEQLYAQFGVGLSRMARTIRERMNIRDNEVFTPTDLINARTLSSVINSFFGTNQLSQFMDQ TNPLAEITHKRRLSALGPGGLSRERAGFEVRDVHYTHYGRLCTIETPEGPNIGLISSLCVHAKINNLGFIETPYRKVQDG RVVVEEPVVYLSAEDEDGKTIAQANAEYDEKGNFTTPKVKARFEGDFPIIEPERLDLMDIAPNQITSIAASLIPFLEHDD ANRALMGSNMQRQAVPLLRPQAPIVGTGLEGRVASDSRTLINAEGNGVVEYVDANEIKIRYDRNEDEKLVSFDDDIKTYR LIKFKKTNQSTCINLKPIVRKGQRVVEGQVLCEGYATENGELALGRNLKVAFMPWQGYNFEDAIVISERVVSQDIFTSLH IEEFELEVRDTKRGEEELTSDIPNVSEEATKDLDENGIIRIGAEVREGDILIGKITPKGESDPSPEEKLLRAIFGDKAGD VKDASLKTPPSIRGVVIDTKLFSRAKKADKKEEKAALERLDLNHERAVRQLRERLIDKLFAIVNGKTSQGVYNVYKELLI PKGAKFTQKMLAELDFANINPSKWTTDDDKNELVKQALHFYNIKLNEELGAYRRDKFAITVGDELPSGIVQMAKVYVAKK RKLKVGDKMAGRHGNKGIVARIVRDEDMPFLEDGTPVDIVLNPLGVPSRMNLGQIYETVLGWAGQKLGVKFATPIFDGAS TEEVEEWVAKAGLPASGRTYLYNGLTGERFDQPTTVGVIYMLKLGHMVDDKMHARSIGPYSLITQQPLGGKAQFGGQRFG EMEVWALEAFGASNILQEILTVKSDDVIGRAKTYEAIVKGDNLPTPSVPESFNVLVHELRGLGLDITLE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 45 |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sph21_2406 | YP_004317630.1 | DNA-directed RNA polymerase subunit beta | NC_002516.2.881699.p | Protein | 0.0 | 49 |
| Sph21_2406 | YP_004317630.1 | DNA-directed RNA polymerase subunit beta | NC_009085.4918494.p0 | Protein | 0.0 | 45 |
| Sph21_2406 | YP_004317630.1 | DNA-directed RNA polymerase subunit beta | NC_010410.6003841.p0 | Protein | 0.0 | 45 |
| Sph21_2406 | YP_004317630.1 | DNA-directed RNA polymerase subunit beta | NC_011586.7046027.p0 | Protein | 0.0 | 45 |
| Sph21_2406 | YP_004317630.1 | DNA-directed RNA polymerase subunit beta | NC_010400.5987325.p0 | Protein | 0.0 | 45 |
| Sph21_2406 | YP_004317630.1 | DNA-directed RNA polymerase subunit beta | NC_010611.6233925.p0 | Protein | 0.0 | 45 |
| Sph21_2406 | YP_004317630.1 | DNA-directed RNA polymerase subunit beta | NC_011595.7060572.p0 | Protein | 0.0 | 45 |
| Sph21_2406 | YP_004317630.1 | DNA-directed RNA polymerase subunit beta | CP004022.1.gene2794. | Protein | 0.0 | 45 |
| Sph21_2406 | YP_004317630.1 | DNA-directed RNA polymerase subunit beta | CP000675.2.gene392.p | Protein | 0.0 | 45 |
| Sph21_2406 | YP_004317630.1 | DNA-directed RNA polymerase subunit beta | NC_011035.1.6448762. | Protein | 0.0 | 44 |
| Sph21_2406 | YP_004317630.1 | DNA-directed RNA polymerase subunit beta | CP002695.1.gene18.p0 | Protein | 0.0 | 44 |
