Gene Information

Name : HMPREF9243_0110 (HMPREF9243_0110)
Accession : YP_004320522.1
Strain : Aerococcus urinae ACS-120-V-Col10a
Genome accession: NC_015278
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 112770 - 113471 bp
Length : 702 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGTCATACATTGAAGTTAATAACAATACAAAAGTCTATTCCTCTGGCCAAAACCAAATTTACGCCAACAAGGATGTTTC
ATTTGAAGTGAAAAAGGGAGACTTAGTCATTATTGTTGGTGCCTCAGGGGCAGGAAAATCGACCCTATTAAATATTTTGG
GCGGGATGGACCATAATGATTCTGGTCAAGTTATTATTGATGGTAAGGATATCAGTCAGTTTTCTCGGCAAGAACTCGCT
ACTTACCGACGAGAAGATGTGGGTTTTGTGTTTCAATTCTATAACCTAGTCCCTAACTTAACCGCCAAGGAAAATGTCGA
ATTGGCGGCAGAAATTACCACCAACCCTTTAAGTGCCGAATCCCTGCTTAAGGATGTCGGTTTAGCTGATCGGATGGGTA
ACTTCCCCTCTCAATTATCGGGTGGGGAACAGCAAAGGGTATCCATTGCCCGGGCCCTAGCCACTAATCCTAAGCTCTTA
CTTTGTGACGAACCTACAGGAGCCTTGGACTATAAGACTGGTAAGCAAGTCTTAAAGATCCTCCAGGACATGTCACGAGA
CAAGGGTGTGACTATTATTATTGTTACCCATAATGGTGCCCTAGCGCCAATTGCCGACTGCGTGATTTATATGCGGGATG
CGACTATCGCTAATATTGAGCGTCATGACCAGCCTGAAGATATTGAAAATATTGAATGGTAG

Protein sequence : 
MSYIEVNNNTKVYSSGQNQIYANKDVSFEVKKGDLVIIVGASGAGKSTLLNILGGMDHNDSGQVIIDGKDISQFSRQELA
TYRREDVGFVFQFYNLVPNLTAKENVELAAEITTNPLSAESLLKDVGLADRMGNFPSQLSGGEQQRVSIARALATNPKLL
LCDEPTGALDYKTGKQVLKILQDMSRDKGVTIIIVTHNGALAPIADCVIYMRDATIANIERHDQPEDIENIEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF9243_0110 YP_004320522.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 6e-75 67
HMPREF9243_0110 YP_004320522.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-41 43
HMPREF9243_0110 YP_004320522.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-38 42
HMPREF9243_0110 YP_004320522.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-33 41
HMPREF9243_0110 YP_004320522.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 6e-36 41