Gene Information

Name : HMPREF9243_1877 (HMPREF9243_1877)
Accession : YP_004322000.1
Strain : Aerococcus urinae ACS-120-V-Col10a
Genome accession: NC_015278
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1895565 - 1896314 bp
Length : 750 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGCTTTTAGATGTGATTCATTTAGAAAAAACATACGGCCATGGCGGTAATGCCACCAAGGCCTTACGGGACGTCACTTT
TCAAGCGGAAGCTGGCGAATTCGTGGCCATTATGGGAGAGTCCGGTTCAGGAAAATCCACGCTCTTAAACATTATTGCCA
CCTTGGATAAGGCTACTGGCGGTCAAGTTTTCTTAAATGGCCAGGCCTTGGCAGCTTTAGGAGAAAGTGACTTAGCAGCT
TTTCGCCGGCAAGAGTTGGGCTTTGTTTTTCAAGATTTTAACATGCTCAATACCTTCAATAACCGGGATAACATTCTGCT
CCCCCTGGTACTCTCTAATACTGACTATAGTGAAATGGAGCGACGTTTAGCTAAGCTTGCTCCTTTACTGGGGATTGAAG
ACCTTTTGGATAAGTATCCCTATCAAATTTCTGGGGGTCAACAGCAACGGGTTGCCATTGGACGGGCTATTATTACCCAG
CCCAGCCTGATTCTTGCTGATGAGCCGACTGGAGCTTTAGATTCGAAGAACAGTGAAGCGACTATGAAGCTTTTTACTCA
GTTAAACCAGCAGGGCTTGACCATATTCATGGTAACCCATTCCTTACGTTGTGCGGCATATGCTAAGCGAGTGCTCTTTA
TTAAGGATGGGATTGTCTACCATGAAATTTACCGGGGTGAGGCTTCTTTAGCTGATTTCCAGGAAAAAATCGCTAACAGT
CTCTCCTTTCTAAATCGGGAGGAGGGCTAG

Protein sequence : 
MLLDVIHLEKTYGHGGNATKALRDVTFQAEAGEFVAIMGESGSGKSTLLNIIATLDKATGGQVFLNGQALAALGESDLAA
FRRQELGFVFQDFNMLNTFNNRDNILLPLVLSNTDYSEMERRLAKLAPLLGIEDLLDKYPYQISGGQQQRVAIGRAIITQ
PSLILADEPTGALDSKNSEATMKLFTQLNQQGLTIFMVTHSLRCAAYAKRVLFIKDGIVYHEIYRGEASLADFQEKIANS
LSFLNREEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF9243_1877 YP_004322000.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 7e-44 49
HMPREF9243_1877 YP_004322000.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-43 47
HMPREF9243_1877 YP_004322000.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-38 43