Gene Information

Name : Psed_4503 (Psed_4503)
Accession : YP_004334511.1
Strain : Pseudonocardia dioxanivorans CB1190
Genome accession: NC_015312
Putative virulence/resistance : Resistance
Product : phosphonate-transporting ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.28
Position : 4826371 - 4827099 bp
Length : 729 bp
Strand : -
Note : PFAM: ABC transporter-like; KEGG: fal:FRAAL6466 ABC-type transport systems, involved in lipoprotein release, ATPase components; SMART: ATPase, AAA+ type, core

DNA sequence : 
GTGACCACCGCCGCAGGCTCCCCGCCCGGCCGCGCCGAGGCCCTCATCGAGCTCGTCGGCGTCGGCAAGACCTATCGCAG
CGGCCCACTCGAGGTCGACGCCCTGCGCGGGGTGGACCTGCGCATCGACGAGGGCGAGTACGTCGCGATCATGGGACCGT
CGGGCTCCGGGAAGTCGACGTTGATGCACGTACTGGGCTGCCTCGACGTCGCCTCGACCGGCAGCTACCGGCTGGCGGGC
GCCGACGTCGGGCAGATGGACGAGGAGGAGCTCGCCGCCGTCCGCAACCGGCGCATCGGGTTCGTCTTCCAGCAGTTCAA
CCTGCTGTCGTCGATGCCGGCGTGGCGCAACGTCGAGCTGCCGCTCAGCTACGCCGGCGTCGCGCGCGCCGAGCGCAGGG
ACCGGGCCCTCGCGGCACTGGCCCGGGTCGGCCTCGCCGCGCGCGCCGAACACCGTCCCGGTGAGCTCTCCGGCGGCCAG
CAGCAACGCGTCGCGATCGCGCGGGCCCTGGTCACCGAACCCGCCCTGCTGCTGGCCGACGAGCCGACGGGCAACCTCGA
CTCCGCCGCGACCACCGACGTGCTCGCGCTGCTCGCCGAGCTCAACGCGCTCGGCCGCACCGTCGTGCTGATCACGCACG
AGGAGGACGTCGCCGCGGCGGCCTCGCGCGTCGTGCGGATCCTGGACGGGGAGATCCACTCCGACACCGGTGCGGGGGTC
GCCGCGTGA

Protein sequence : 
MTTAAGSPPGRAEALIELVGVGKTYRSGPLEVDALRGVDLRIDEGEYVAIMGPSGSGKSTLMHVLGCLDVASTGSYRLAG
ADVGQMDEEELAAVRNRRIGFVFQQFNLLSSMPAWRNVELPLSYAGVARAERRDRALAALARVGLAARAEHRPGELSGGQ
QQRVAIARALVTEPALLLADEPTGNLDSAATTDVLALLAELNALGRTVVLITHEEDVAAAASRVVRILDGEIHSDTGAGV
AA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-30 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-30 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psed_4503 YP_004334511.1 phosphonate-transporting ATPase NC_012469.1.7686878. Protein 2e-50 53
Psed_4503 YP_004334511.1 phosphonate-transporting ATPase NC_008702.1.4606598. Protein 3e-40 52
Psed_4503 YP_004334511.1 phosphonate-transporting ATPase CP001581.1.gene598.p Protein 1e-36 42
Psed_4503 YP_004334511.1 phosphonate-transporting ATPase CP001581.1.gene798.p Protein 2e-35 42