|
Name : Psed_4782 (Psed_4782) Accession : YP_004334781.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Unknown Product : malate synthase Function : - COG functional category : C : Energy production and conversion COG ID : COG2225 EC number : 2.3.3.9 Position : 5118634 - 5120835 bp Length : 2202 bp Strand : - Note : KEGG: dvm:DvMF_2183 malate synthase G; PFAM: Malate synthase DNA sequence : ATGGCCGCAACACCGACCGCTCGCGACACCGGCCGGACGGCCGGGGCGCAGGACGCGGGCCTGCAGGTCGACCCCGCACT GGACAGGTTCGTGACCGAGGAGCTGTTGGCCGGTCTCGACGACATCACCCCGGCGCGGTTCTGGTCCGCGCTCGCCGAGC TCCAGGCCGACTTCGCGCCGCGCGTGCGTGAGGTGCTGGAGCGCCGCGACGCGCTGCAGGCCCGGATCGACGGCTGGCAC GCCGAGCACCCGGGCCCGGTCACCGGCGCGACCAGGGACGCGTACGCGCGCTTCCTCACCGACATCGGCTACCTGGAACC GGAGGCGCAGCCTCGGCTCACGGTGACGAACGTCGACCCGGAGATCGCCGAGGTGGCGGGCGCCCAGCTCGTCGTGCCGG CGACGGTGCCGCGCTACGCGCTCAACGCCGCCAACGCCCGCTGGGGTTCGCTGTACGACGCGCTCTACGGGACCGACGTG CTGCCGCTGGACCACGAGCTCGCGCCCGGGTATGACGAGCGGCGCGGCGCCCAGGTCATCGCCGAGGCCGACCGCCTGCT CGACGAGCTGTTCCCGCTGGCCGACGGCTCGCACGCCGACGTCGACGCGTACACGGTCGCCGACGGCGCGCTCGTCCCCG CGCTGGCCGATCCGGCCGGGTTCGCCGGGCACCGCGGCGACGCGGCCGAGCCGACAGCAGTCCTGTTGCGCCGCAACGGG TTACACGTCGAGCTCCGGATCGACCGGGCACACCGCGTCGGGCGCGGTCATCACGCGGGCGTCGCCGACGTGGTGCTGGA GTCGGCGGTCACGACGATCGTCGACCTCGAGGACTCCGTCGCGACCGTCGACGGCGAGGACAAGGCGAGCGCCTACCGCA CGTGGCTCGGCCTGATGACCGGGAACCTGGTCGCCAGCTTCGAGAAGGGCGGCCAGACCGTCACCCGGCGCGCCGAGCCC GACCGCGACCACACCGCGCCCGACGGTTCGACGGTCACCCTGCCGGGACGGTCGGTGATGCTGGTGCGCGTCGTCGGCCA CCACATGACGACCGACGCCGTGCGCACCGCCGCCGGGGACCAGGTCGTCGAGGGGCTGCTCGACCTGCTCGTCGCGGCCA CCGCGGCGCTGCACGACCTGCGCGGCCTCGGGCCGCACCGCAACTCCCGCACCGGCAGCGTCTACGTCGTGAAGCCGAAG CAGCACGGCTCGGCCGAGGTGGCCCTGACCGTCGAGATGTTCGCGGCGGTCGAGCGCGCGCTGGGGCTGCCCGAGCGGAC GCTCAAGGTCGGCGTCATGGACGAGGAGAAGCGGACGTCGGTCAACCTGGAGGCGTGCATCGCCGCCGCCCAGGACCGGG TGATCTTCGTCAACACCGGCTTCCTCGACCGCACCGGCGACGAGATCCACACCTGCTTCGCGGGCGGCCCGGTGGTGCGC AAGGGCGACATGCGGTCGGCGACGTGGTTCGGCGCGTACGAGGACCGCAACGTCGACGTCGCGCTGCGGGCCGGGTTCGC CGACGTCGCCCAGATCGGCAAGGGCATGTGGGCCAAGCCCGCCGCGATGCGCGAGATGCTCGAGGCCAAGATCGAGCACC CCCGCGCGGGCGCCGACACCGCGTGGGTGCCCTCGCCCACCGCCGCGACCCTGCACGCGCTGCACTACCTGCGCGTCGAC GTCGGCGAGCGGCAGCGCGAGATCGCGGCGCGTCCCCTGACCGACCGCGCGCTGCTGCTGGAGCCGCCGCTGCTCGGCCC GGGGTCGACGGGGCGGCCATCGGCCGACGACGTCCGTCACGAGCTGGAGACGAACGCCCAGTCGATCCTGGGTTACGTCG TGCGCTGGGTGGGGCTGGGCATCGGGTGCTCGACGGTGCCGGACCTGGAGGGCGTCGGGCTCATGGAGGACCGCGCCACG CTGCGGATCTCCAGCCAGCTCATCGCCAACTGGCTCGCGCACGGCATCGTCGACGAGCAGACGGTCCGGGAGACGTTCGC CCGGCTCGCGGCCTTCGTCGACGAGCAGAACGCCCGCGAGCCCGGCTACCGGCCGATGAGCGACGACCTGGAGGCGAGCG AGTCGTTCCAGGCCGCGCTGGAGCTGGTGTTCACCGGTCGTGAGGAACCGAACGGCTACACCGAGCGGGTGCTCACCGCG TGGCGCCGCAAGGCCAAGGAGAACGCGGGCCGGCAGGCCTGA Protein sequence : MAATPTARDTGRTAGAQDAGLQVDPALDRFVTEELLAGLDDITPARFWSALAELQADFAPRVREVLERRDALQARIDGWH AEHPGPVTGATRDAYARFLTDIGYLEPEAQPRLTVTNVDPEIAEVAGAQLVVPATVPRYALNAANARWGSLYDALYGTDV LPLDHELAPGYDERRGAQVIAEADRLLDELFPLADGSHADVDAYTVADGALVPALADPAGFAGHRGDAAEPTAVLLRRNG LHVELRIDRAHRVGRGHHAGVADVVLESAVTTIVDLEDSVATVDGEDKASAYRTWLGLMTGNLVASFEKGGQTVTRRAEP DRDHTAPDGSTVTLPGRSVMLVRVVGHHMTTDAVRTAAGDQVVEGLLDLLVAATAALHDLRGLGPHRNSRTGSVYVVKPK QHGSAEVALTVEMFAAVERALGLPERTLKVGVMDEEKRTSVNLEACIAAAQDRVIFVNTGFLDRTGDEIHTCFAGGPVVR KGDMRSATWFGAYEDRNVDVALRAGFADVAQIGKGMWAKPAAMREMLEAKIEHPRAGADTAWVPSPTAATLHALHYLRVD VGERQREIAARPLTDRALLLEPPLLGPGSTGRPSADDVRHELETNAQSILGYVVRWVGLGIGCSTVPDLEGVGLMEDRAT LRISSQLIANWLAHGIVDEQTVRETFARLAAFVDEQNAREPGYRPMSDDLEASESFQAALELVFTGREEPNGYTERVLTA WRRKAKENAGRQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcB | CAE85241.1 | GlcB protein, malate synthase G | Not tested | PAI V 536 | Protein | 5e-166 | 50 |
