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Name : Psed_5282 (Psed_5282) Accession : YP_004335269.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Unknown Product : major facilitator superfamily protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2271 EC number : - Position : 5638482 - 5639825 bp Length : 1344 bp Strand : - Note : PFAM: Major facilitator superfamily MFS-1; KEGG: nfa:nfa24070 transporter DNA sequence : ATGGCGACGCCTGCAACGACGCAGCAACGACCACCGATGCGCAGGGTCGCGCTCTCGGTGCTCATCGGCACGACGATCGA GTGGTACGACTTCCAGCTCTACGGTGCGGCCGCCGCGCTGGTGTTCGCCCCGCTGTACTTCCCGACGGTCGACCCCGTCG CGGGCACCCTGCTCGCGTTCTCGACCTTCGCGATCGGCTTCGGCGCCCGGCCCCTGGGCGGCATCGTCTTCGGGCACTTC GGCGACCGGATCGGGCGCAAGAAGGTGCTCGTCATGTCGCTGACGATGATGGGCGTCGCGACGTTCCTCATCGGCCTGCT GCCGACGTACGCGAGCATCGGCATCTGGGCGCCGATCCTGCTCGTGGTGCTGCGCCTGTTCCAGGGCTTCGGGGTCGGCG GCGAGTGGGGCGGCGCGGTGCTGACCGCCGTCGAGTACTCGTCGAAGGGCAGACGCGGGCTCTACGGGAGCCTCCCGCAG ATCGGCGTGCCGGCCGGCCTCCTGCTCTCGACGCTCGCGTTCCTCGCGGTCAGCGGCCTGCCCGACGACCAGTTCCGGTC GTGGGGCTGGCGCATCCCTTTCCTGATCAGCATCGTGCTCGTCGCGATCGGGCTGTTCATCCGGCTGAAGCTCACCGAGA CGCCGGTGTTCGAGAAGGTCCGCGAGACGCGCACCGAGGCCCGTGTCCCGCTGTGGCTCGCGATCAGGACCTACCCGCTG CAGATCCTGCTGGCCATCGGCTCGATCGTCAGCACGGGCTCGTACTTCTACGTCGTCAACACCTACGCGCTGAGCTACGG CCCGTCGGTGAAGTCGTTCTCCCGCAACGAGATGCTCTTCGCGATCCTGCTGTCGGCGGCGGTCGCGGCCGCGGCGCTGC CGGTCTTCGGAGCCCTCTCCGAACGCTTCGGCCGCAAACGGATGATCCTCACCGGGCTCGCCGCGATGGCCGTCTGGATC TTCCCGACGATGCTCGCGGTCGACAGCGGGAACCTGACCCTGATGATCCTCGCCTACCTCGTCGGCGCGGTCTTCTTCAG CATCTCCTACGGCCCGCAGGCGACCTACATCGTCGAGATGTTCGACGCCCGCGTCCGCTTCAGCGCAGCGTCGACCAGCT TCCAGATCGGCGTGCTGCTCGGCGGCGCGCTGGCGCCGATCATCGCGGCCGCGCTCGTGAAGGGCACCGGGACCGTGGTG TCGGTGGCCGTCTACGTGTGCGTGATGTCGCTGATCTCGCTCGTGTGCGTGTGGGCGATCAGCGCCCGGACCATCGCCCG CGGCAGCGCGGACCTCGACGAGACGGCCATCGTCGCTGCCGGCGTGCCGAGCAAGCAGGGATGA Protein sequence : MATPATTQQRPPMRRVALSVLIGTTIEWYDFQLYGAAAALVFAPLYFPTVDPVAGTLLAFSTFAIGFGARPLGGIVFGHF GDRIGRKKVLVMSLTMMGVATFLIGLLPTYASIGIWAPILLVVLRLFQGFGVGGEWGGAVLTAVEYSSKGRRGLYGSLPQ IGVPAGLLLSTLAFLAVSGLPDDQFRSWGWRIPFLISIVLVAIGLFIRLKLTETPVFEKVRETRTEARVPLWLAIRTYPL QILLAIGSIVSTGSYFYVVNTYALSYGPSVKSFSRNEMLFAILLSAAVAAAALPVFGALSERFGRKRMILTGLAAMAVWI FPTMLAVDSGNLTLMILAYLVGAVFFSISYGPQATYIVEMFDARVRFSAASTSFQIGVLLGGALAPIIAAALVKGTGTVV SVAVYVCVMSLISLVCVWAISARTIARGSADLDETAIVAAGVPSKQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 2e-52 | 43 |
| DIP2166 | NP_940476.1 | ABC transporter permease | Not tested | Not named | Protein | 7e-51 | 41 |
