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Name : Hipma_1384 (Hipma_1384) Accession : YP_004340399.1 Strain : Hippea maritima DSM 10411 Genome accession: NC_015318 Putative virulence/resistance : Unknown Product : DNA-directed RNA polymerase subunit beta Function : - COG functional category : K : Transcription COG ID : COG0085 EC number : - Position : 1360640 - 1364674 bp Length : 4035 bp Strand : - Note : COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; HAMAP: DNA-directed RNA polymerase, beta subunit, bacterial-type; InterProIPR007644; IPR007642; IPR007645; IPR019462; IPR 007120; IPR007641; IPR010243; KEGG: gsu:GSU2863 DNA-directed R DNA sequence : ATGGCTGAGCCTCTTAAATTGGAATATAGAATGCGTGTGAACTTTTCAAAAGCTAAAAAGGTTTTGGAGATTCCTGACCT TTTAAGGCTTAACATAAATTCATACCAAACATTCTTGGAAAAGAACAGCAAAAAAGAAAAAAATTTGGATAATGCTTTAA AGTCCATTTTTCCTATAGATGATGTGCATGGTAGGCTTAGACTTGAGTTGGTTGATTGGGATATAACCCCACCCAAATTT GATCCAGATGAATGTAAGGTTAAAGGAATTTCTTACACAGGCAATCTCATAATAAAAGTTAGGCTTACCCAGTGGACTGT AGATGAACAAACGGGTGAAAAAATAGGTGTTGAGGACATAAAAGAGCAGGAAATATATGTAGGTGAAATTCCCCTTATAA CTGAATCTGGTAGTTTTATTATAAACGGAGTTGAAAGAGTTATAGTTGGACAGCTTCATCGCTCACCAGGTGTCATATTC AAAAAGACGGGTGATATAGGTGGAAAAGGACTCTATTATGCCCAGATAATCCCAGAAAGAGGAAGCTGGGTAGAGTTTGA GACAGAGCCGAGAGAGGTTCTATCTACCAGAATTGACAGGAAGAAGAAATTCCCTGCCACGATACTGCTTCAGGCTATGG GTATGAGTGAGGCCGATATATTAAGGGAATTCTATGAGGTTGTAAGGGTAAAGATAGAAAACGGTCAAATATTTGCGCAG CTAAGTGAATCTATAATAGGTTTTAAAGTTGATAAAGATGTGGAGATTGATGGTGAAGTTGTAATAAAGGAAGGAAGAAA GCTCACTACTAGGCTATTTAGACAACTTAAAGATGTTGGCGTTGAATATGTACCGATAAGAGAAAGCGAGCTTTACAATA AGTATTCGGCTGAGATTGTAGAGGCTGAAGATGAAGAAGGCGTAGATGTAGTTTTGGGTATAGGCACTAAGATAACCAAG GAAAAATTAGGCTTTTTAAAGAAGTTTGATAAGGAGTTTAATGTCCTATACTCAAAATTTGATGACTATCTCATTTTAAA TACTGTTATAGCATCAAGGGAGGTTTTAAGGAAAAGAAAAGTTGCCTTACCGGACAGTATAGCTATTGATGATTTGGCAA GGGTATTTATACATACACTTCTAAGGCCGGGTGAACATACATCTATAGAAGATGCCAAGAAATTCTTTGAGAATCTGTTT TTTAATCCAGAGAGATATGATGTATCTCAAGAGGGAAGAATAAGATTAAATGAAACATTTAATATAAATGTGCCAGAAGA TGTTAGAACCCTCACGAGGGAAGATTTTGTGGGTCTTATAAAACATGTAGTTTTGCTTGAAAATGATCAAGTAATTCCTG ATGATGTTGACAGCCTTTCCAATAGGAAGGTTAACCTTGTAGGGGATCAGCTTTACCGTGAGATAAGGAATGGCCTTTTG AGAATGCAAAGGCTCATAAAGGATAAGATGGTAATGTCCGATGCGGAAAATATCATGCCCTATGATGTGATAAATGCCAA ACCAGTGGCTGTTGCTATAAAGGACTTCTTTTCTACAGGTCAGCTGTCTCAATTTTTGGATCAAACCAATATCCTTTCTG AAATTTCACATAAAAGAAGGTTGTCTGCATTGGGAAGCGGCGGTCTTACCAGAGAAAGAGCTGGTTTCGAAGTAAGAGAC GTACATCCAACTCATTACGGTAGAATATGTCCTATAGAAACCCCAGAGGGTGCCAACATTGGACTTATTTCATCGTTAGC CGTTTATGCTAAAATAAATGAATTTGGCTTTATAGAAACTCCATATAGGATTGTAAAAGATGGAAGGGTTACAGATGAGG TTGTTTATCTTTCAGCATCGAAGGAGAAGGGTCATATAATAGCCCAGGCTTCTGCACCGTTAAATGAAGATGGAACATTT AAAAACGAATATGTCTCTGCAAGGAAAGATGGTGAATTTGTTGTTGTAAAAAGGGAAGATGTTGACCTTATGGATATTTC AACAAATCAGATAGTTTCCGTTGCCGCAGGTTTAATTCCTTTTTTGGAGCACGATGATGCCAATAGGGCATTGATGGGGT CTAACATGCAAAGACAGGCTGTTCCCCTTATTAGACCTGAAGCGCCGCTTGTGGGTACTGGCCTTGAGCCTGTTGTTGCA AAATATTCACGCTATGCTGTAGTGGCTAAAAGAGACGGTAAGGTTGTAAGGATAGACGATAAGATATACATCTCTTGCAA AACAGAGAATGGTTATGAGCTAGATGTCTATCCATTGAAAAAATTTATTCGCTCAAACCAAGATACCTGTTTCTCCCATA ACCCTATAGTTGATGTAGGTGATGAGGTAAAGACAGGTCAAATCATAGCAGATGGACCTTCTATGGATAAGGGAGAACTT GCTTTGGGTAAAAACTTAGTTGTGGCTTTTGTATCTTGGAGGGGCTACAATTATGAGGATGGTATTACAATCTCAAGAAG GGTCGTTGAGGAGGATTTGTACACCTCGATACATATAAAAGAATTTACCCTCTATGTAAGGGATACCAAATTTGGCATGG AAGAGATAACGGCAGATATACCTAATGCTTCAAGTGAGACATTGAGAAATTTAGACAAAAATGGCATAGTTAGAATTGGT GCCTATGTAAAGCCGAATGATGTACTTGTAGGTAAGGTTACACCGAAAGCTGAAACCCATTATTCTCCAGAAGAGAAACT CTTGCGCTCAATATTTGGAGAGAAAGCTACCAATGTTGCCGATACATCACTTAGAGTTCCTCCGGATACAAGCGGTATAG TAGTTGATGTTAGAATTATGCACAGGCGTGGGGCAAAAATTAATCCAAGGGAAAAGGAAATAATAGAGCAGCAGAAAGAA AAGATAAATAAGGAACTTAAGCATAAGCTCGAATTGTTGAGTAAGCTAAGACTCGATAGTATTAAAGATGCAATAATTGA AAGTGACATAAAGACAAAAGAAGAGCTTGAGGGATTATCCGAAAAAGAACTTGTGCCGCTTTTGCCTAAGGATTTTGATA TAAAAGCTTTGAATAGGCACTATAAAGAAATGGAGAAATCCATCAAAGATTATCATACTAAGCTTATAAAAGGGGTTGAG AAAGAAAGTGACTTGCCTCCTGGTGTTATCTCTGTTGTCAATGTCTATGTAGCAACAAAAAGAAAGCTTTCCGTTGGCGA TAAGATGAGTGGTCGCCATGGAAATAAAGGTGTTGTATCAAAAATCTTGCCTGTTCAAGATTTGCCTTTCTTGGAAGATG GGACACCTGTTGATATAGTTTTAAATCCTCTTGGTGTTCCCTCCAGAATGAACATTGGCCAAATTATGGAAACCCACCTT GGGTGGCTCTCAAAAGGCCTAGGTAAGAAAATAGACCATCTGCTTAAGGCTGGAAGAAAGGATATACTGAAAGACTTTCT CAAAAAGATATACAATAGCGAGAAGGCAGGAGAACTTATAGAGAGTTTAAGTGATGAAGAGGTAGAAAAGTATGCTAAGG AATGGGTAAGAGGCGTTCACTTTGCAAACCCTGTATTTGAAGGTGCAAAAGAAAAGGATTTGGAATATTTAGAGGGTCTT CTAGGCTTTAAGAGGCTTAAGAGTGAGGTCTATGATGGTATAACGGGTGAGAAGTTCTTAGAGCCTGTAACCGTTGGTGT CATGTATGTATTAAAACTACACCATCTTGTTGATGATAAAGTTCATGCAAGGAGTGTTGGCCCGTATTCTTTGGTTACTC AACAGCCTCTTGGGGGAAAAGCCAACTTTGGTGGCCAGAGGTTCGGAGAGATGGAGGTTTGGGCACTTGAGGGATACGGT GCAGCTTATACACTCCATGAGATGTTAACAGTAAAATCCGACGACGTTGATGGTAGAAAGTTGACATATGAGGCAATCGT TAAGGGAAGACCAATCCCGTTGGGCGGTGTTCCAGAATCGTTCAACGTGTTGGTAAAGGAAATGCAGGCTCTGTGTTTGG ATGTGGAGCTGCTTAAGGATATAAGAAGGAAATAG Protein sequence : MAEPLKLEYRMRVNFSKAKKVLEIPDLLRLNINSYQTFLEKNSKKEKNLDNALKSIFPIDDVHGRLRLELVDWDITPPKF DPDECKVKGISYTGNLIIKVRLTQWTVDEQTGEKIGVEDIKEQEIYVGEIPLITESGSFIINGVERVIVGQLHRSPGVIF KKTGDIGGKGLYYAQIIPERGSWVEFETEPREVLSTRIDRKKKFPATILLQAMGMSEADILREFYEVVRVKIENGQIFAQ LSESIIGFKVDKDVEIDGEVVIKEGRKLTTRLFRQLKDVGVEYVPIRESELYNKYSAEIVEAEDEEGVDVVLGIGTKITK EKLGFLKKFDKEFNVLYSKFDDYLILNTVIASREVLRKRKVALPDSIAIDDLARVFIHTLLRPGEHTSIEDAKKFFENLF FNPERYDVSQEGRIRLNETFNINVPEDVRTLTREDFVGLIKHVVLLENDQVIPDDVDSLSNRKVNLVGDQLYREIRNGLL RMQRLIKDKMVMSDAENIMPYDVINAKPVAVAIKDFFSTGQLSQFLDQTNILSEISHKRRLSALGSGGLTRERAGFEVRD VHPTHYGRICPIETPEGANIGLISSLAVYAKINEFGFIETPYRIVKDGRVTDEVVYLSASKEKGHIIAQASAPLNEDGTF KNEYVSARKDGEFVVVKREDVDLMDISTNQIVSVAAGLIPFLEHDDANRALMGSNMQRQAVPLIRPEAPLVGTGLEPVVA KYSRYAVVAKRDGKVVRIDDKIYISCKTENGYELDVYPLKKFIRSNQDTCFSHNPIVDVGDEVKTGQIIADGPSMDKGEL ALGKNLVVAFVSWRGYNYEDGITISRRVVEEDLYTSIHIKEFTLYVRDTKFGMEEITADIPNASSETLRNLDKNGIVRIG AYVKPNDVLVGKVTPKAETHYSPEEKLLRSIFGEKATNVADTSLRVPPDTSGIVVDVRIMHRRGAKINPREKEIIEQQKE KINKELKHKLELLSKLRLDSIKDAIIESDIKTKEELEGLSEKELVPLLPKDFDIKALNRHYKEMEKSIKDYHTKLIKGVE KESDLPPGVISVVNVYVATKRKLSVGDKMSGRHGNKGVVSKILPVQDLPFLEDGTPVDIVLNPLGVPSRMNIGQIMETHL GWLSKGLGKKIDHLLKAGRKDILKDFLKKIYNSEKAGELIESLSDEEVEKYAKEWVRGVHFANPVFEGAKEKDLEYLEGL LGFKRLKSEVYDGITGEKFLEPVTVGVMYVLKLHHLVDDKVHARSVGPYSLVTQQPLGGKANFGGQRFGEMEVWALEGYG AAYTLHEMLTVKSDDVDGRKLTYEAIVKGRPIPLGGVPESFNVLVKEMQALCLDVELLKDIRRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 47 |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Hipma_1384 | YP_004340399.1 | DNA-directed RNA polymerase subunit beta | CP004022.1.gene2794. | Protein | 0.0 | 48 |
| Hipma_1384 | YP_004340399.1 | DNA-directed RNA polymerase subunit beta | NC_002695.1.914942.p | Protein | 0.0 | 48 |
| Hipma_1384 | YP_004340399.1 | DNA-directed RNA polymerase subunit beta | CP000034.1.gene3741. | Protein | 0.0 | 48 |
| Hipma_1384 | YP_004340399.1 | DNA-directed RNA polymerase subunit beta | NC_002516.2.881699.p | Protein | 0.0 | 48 |
| Hipma_1384 | YP_004340399.1 | DNA-directed RNA polymerase subunit beta | CP001138.1.gene4362. | Protein | 0.0 | 47 |
| Hipma_1384 | YP_004340399.1 | DNA-directed RNA polymerase subunit beta | CP001918.1.gene250.p | Protein | 0.0 | 47 |
| Hipma_1384 | YP_004340399.1 | DNA-directed RNA polymerase subunit beta | NC_009085.4918494.p0 | Protein | 0.0 | 47 |
| Hipma_1384 | YP_004340399.1 | DNA-directed RNA polymerase subunit beta | NC_011586.7046027.p0 | Protein | 0.0 | 47 |
| Hipma_1384 | YP_004340399.1 | DNA-directed RNA polymerase subunit beta | NC_010400.5987325.p0 | Protein | 0.0 | 47 |
| Hipma_1384 | YP_004340399.1 | DNA-directed RNA polymerase subunit beta | NC_010611.6233925.p0 | Protein | 0.0 | 47 |
| Hipma_1384 | YP_004340399.1 | DNA-directed RNA polymerase subunit beta | NC_011595.7060572.p0 | Protein | 0.0 | 47 |
| Hipma_1384 | YP_004340399.1 | DNA-directed RNA polymerase subunit beta | NC_010410.6003841.p0 | Protein | 0.0 | 47 |
| Hipma_1384 | YP_004340399.1 | DNA-directed RNA polymerase subunit beta | CP000647.1.gene4402. | Protein | 0.0 | 47 |
| Hipma_1384 | YP_004340399.1 | DNA-directed RNA polymerase subunit beta | CP000675.2.gene392.p | Protein | 0.0 | 47 |
| Hipma_1384 | YP_004340399.1 | DNA-directed RNA polymerase subunit beta | NC_011035.1.6448762. | Protein | 0.0 | 46 |
| Hipma_1384 | YP_004340399.1 | DNA-directed RNA polymerase subunit beta | NC_008702.1.4609796. | Protein | 0.0 | 45 |
