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Name : PSEBR_a1515 (PSEBR_a1515) Accession : YP_004352715.1 Strain : Pseudomonas brassicacearum NFM421 Genome accession: NC_015379 Putative virulence/resistance : Unknown Product : cytochrome C-type biogenesis protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1845738 - 1847726 bp Length : 1989 bp Strand : + Note : - DNA sequence : ATGACTGCTGGCATCTTTATTCCCGAGTTGGGCCACCTGGCGATGATCCTTGCCCTGTGTTTCTCCCTGGTACAGGCCGT GGTGCCCTTGCTCGGTGCCTGGCGCGGCGACCGATTGTGGATGAGCCTGGCCCAGCCGGCGGCGTGGGGGCAATTCGCCT TCATGCTGTTCGCCTTCGGTTGCCTGACCTATGCGTTCATGGCCGACGATTTTTCCGTGGAATACGTCGCCAGCAACTCC AATAGCGCCTTGCCCTGGTACTACAAGTTCAGCGCCGTGTGGGGCGCCCACGAAGGCTCGCTGCTGCTTTGGGCGTTGAT CCTGGCCGGCTGGACCTTCGCCGTCTCGGTGTTCTCCCGGCAGTTGCCCCAGGTGATGCTGGCCCGGGTGCTCGCGGTGA TGGGCATGATCAGCACCGGTTTCCTGCTGTTTTTGATCGTCACCTCCAACCCGTTCGAGCGCATCCTGCCGCAGATGCCG ACGGATGGCCGCGACCTCAACCCATTGCTGCAAGACATCGGCCTGATCGTTCATCCGCCCATGCTCTACATGGGCTACGT CGGCTTCTCCGTGGCCTTCGCCTTCGCCATCGCCGCGTTGCTCGGTGGTCGTCTCGATGCGGCGTGGGCACGCTGGTCGC GTCCGTGGACCATCGTCGCCTGGGCCTTCCTCGGCATCGGTATCACCCTCGGTTCATGGTGGGCCTACTACGAACTCGGC TGGGGCGGCTGGTGGTTCTGGGACCCGGTGGAAAACGCCTCGTTCATGCCCTGGTTGGTGGGCACGGCGCTGATCCATTC CCTGGCGGTCACGGAAAAACGTGGTGTGTTCAAGAGCTGGACCGTGCTGCTGGCCATCGCGGCGTTCTCGCTGAGCCTGC TGGGGACGTTCCTGGTGCGCTCGGGCGTGCTGACGTCGGTGCATGCCTTCGCCTCGGACCCTGAGCGTGGCGTGTTCATC CTGATGTTCCTGCTATTTGTGGTCGGCGGTTCGCTGACGCTGTTCGCCCTGCGTGCGCCGGTGGTCAAGAGCCAGGTTGG CTTCAACCTCTGGTCGCGGGAAACCCTGTTGCTGGGCAATAACCTGGTGCTGGTGGTGGCCGCGTCGATGATCCTGCTGG GGACGTTGTACCCGCTGGTGCTCGATGCGTTGTCCGGTGCCAAGCTGTCGGTGGGCCCGCCGTACTTCAATGCGCTGTTC ATCCCGCTGATGGCTATCCTGATGGTAGTAATGGCCATCGGTATGCTGGTGCGTTGGAAAGATACCCCGGTCAAGTGGCT GCTGGGCATGTTGACCCCGGTGCTGCTGGGCACCGCCGCGCTGGCCGTGGTGGCCGGCGTGGCGTATGGCGATTTCAACT GGGCGGTACTGGCGACGTTCGTGCTGGCAGCCTGGGTATTGCTGGCGGGTGTACGGGACATCTTCGACAAGACCCGGCAC AAAGGCCTGATCAAGGGTCTGCCGACCCTGACCCGCAGTTACTGGGGCATGCAGGTCGCACACCTGGGCATCGCCGTCTG CGCCCTGGGCGTGGTGCTGTCCAGCCAGAACAGTGCCGAGCGCGACCTGCGCCTGGCGCCGGGTGAGTCCATGGACCTGG CCGGCTATCAGTTCGTTTTCGAGGGCGCCAAACATTTCGAGGGCCCGAACTTCACATCCGACAAGGGCACTGTGCGAGTC CTCCGCAACGGCCAGGAAATCACCGTGCTGCACCCGGAAAAACGTCTCTACACCGTGCAGAACTCGGTGATGACCGAAGC CGGCATCGATGCCGGTTTCACCCGCGATCTCTACGTGGCGCTGGGCGAGTCCCTGGGCGACGGCGCGTGGGCGGTGCGGG TCCACGTCAAGCCATTCGTGCGCTGGATCTGGTTCGGTGGCTTGCTCACCGGCCTGGGTGGGGTGCTGGCGGCGCTGGAT CGGCGTTATCGAGTCAAGGTGAAAACCCGGGTGCGTGAAGCCCTGGGCGCGACGGGAGCCACTGCATGA Protein sequence : MTAGIFIPELGHLAMILALCFSLVQAVVPLLGAWRGDRLWMSLAQPAAWGQFAFMLFAFGCLTYAFMADDFSVEYVASNS NSALPWYYKFSAVWGAHEGSLLLWALILAGWTFAVSVFSRQLPQVMLARVLAVMGMISTGFLLFLIVTSNPFERILPQMP TDGRDLNPLLQDIGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTIVAWAFLGIGITLGSWWAYYELG WGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFASDPERGVFI LMFLLFVVGGSLTLFALRAPVVKSQVGFNLWSRETLLLGNNLVLVVAASMILLGTLYPLVLDALSGAKLSVGPPYFNALF IPLMAILMVVMAIGMLVRWKDTPVKWLLGMLTPVLLGTAALAVVAGVAYGDFNWAVLATFVLAAWVLLAGVRDIFDKTRH KGLIKGLPTLTRSYWGMQVAHLGIAVCALGVVLSSQNSAERDLRLAPGESMDLAGYQFVFEGAKHFEGPNFTSDKGTVRV LRNGQEITVLHPEKRLYTVQNSVMTEAGIDAGFTRDLYVALGESLGDGAWAVRVHVKPFVRWIWFGGLLTGLGGVLAALD RRYRVKVKTRVREALGATGATA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 5e-139 | 57 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-126 | 56 |
