Gene Information

Name : PSEBR_a3039 (PSEBR_a3039)
Accession : YP_004354349.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 3755451 - 3756368 bp
Length : 918 bp
Strand : -
Note : -

DNA sequence : 
ATGCGCCAGGACGATATCCCTTCATCCAAGCTGCCACCGCTGAGAGCCATTCAAGCCTTCGAGCAAACCGCGCGTTTTGG
CAACCTGGCAAGAGCCGCCGAAGTGCTGGACCTCACGCCGTCGGCGATCAGCCACCAACTGGCCAAACTGGAGGTCATGA
TTGGTCGACAGTTGTTTGTGCGGGCAGCGCGTGGGGTGACGCTGACACCGGTGGGTGAGCAGTACTTGAAGGACATTTCC
GGTTTGTTGCAAAGCCTTGAGGTCGCTACCGAGCGGGCGGCGAGTGACGTTAGCCTGGATTGCCTGCGGCTGCATTCCTC
CCCCAGTTTTGGCTTGCTCTGGCTGATGCCCCGGCTGGAGTCATTTCGCTTGACCAACCCGGACATCCAAATCAATTTAT
CTTGCTCCTATGAATCACTGCACTTCAGCCAGGACAAGATCGATGTCGATATTCGCCATGGCCGGCCCAACTGGCCCAGC
TATGAAGTGCGCACCGTGCGTAACGAGAGCTTCGCTGTGCTGGCCTCGCCCAAGCTGATCGCACGCTGCGCGGTAAAAAG
CGCAGTGGATCTTCTGGTAGAAGACCTGATCCTTTCCGAAGCGACTTTGCTCAGATGGCCTGAGTGGTTCGCTCAGCATG
GCCTGGCGCGCCCCGAAAAACCCTACGCCTTGAGTTTTGACCGATCCTACATGAGCCTGGAAGCGGCGAGCCACGGGTTG
GGATTTGCCCTGGAAAGCACGCTGCTGGCGCAAAAATACCTCGCCAGCGGTTCGCTCGTTGAGGTCGCCCCCGAAGCTTT
GAGCTCTCCGGTAGCGGCCCACCATTTAGTGTTCCCGAAGGCCCACTCCAGTTTTCCCAGAGTCAGGCGATTTTTGGGTT
GGATGGAAGGGGAGTTGGGGCATGGCTTTGTGTTTTAA

Protein sequence : 
MRQDDIPSSKLPPLRAIQAFEQTARFGNLARAAEVLDLTPSAISHQLAKLEVMIGRQLFVRAARGVTLTPVGEQYLKDIS
GLLQSLEVATERAASDVSLDCLRLHSSPSFGLLWLMPRLESFRLTNPDIQINLSCSYESLHFSQDKIDVDIRHGRPNWPS
YEVRTVRNESFAVLASPKLIARCAVKSAVDLLVEDLILSEATLLRWPEWFAQHGLARPEKPYALSFDRSYMSLEAASHGL
GFALESTLLAQKYLASGSLVEVAPEALSSPVAAHHLVFPKAHSSFPRVRRFLGWMEGELGHGFVF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96226.1 lysR family transcriptional regulator Not tested T-PAI Protein 6e-129 88
unnamed AAT96097.1 lysR family transcriptional regulator Not tested T-PAI Protein 5e-129 88
unnamed AAT96174.1 lysR family transcriptional regulator Not tested T-PAI Protein 8e-129 88
unnamed AAT96053.1 lysR family transcriptional regulator Not tested T-PAI Protein 6e-129 88
unnamed AAT96114.1 lysR family transcriptional regulator Not tested T-PAI Protein 2e-127 87