|
Name : PSEBR_a3736 (PSEBR_a3736) Accession : YP_004355092.1 Strain : Pseudomonas brassicacearum NFM421 Genome accession: NC_015379 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit D Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 4585083 - 4586582 bp Length : 1500 bp Strand : + Note : - DNA sequence : ATGAACATCCTCTACGACGAACACCTCGACGGCCCCTTGCCCAAGGTGGACAAACAGGCGCTGCTTCAAGCCTTGCAGGC ACAGGTTCCAGACCTGGACATCCTGCATCAGGAGGAAGATCTCAAGCCCTACGAATGCGATGGCCTGTCGGCCTACCGCA CCACGCCCCTGCTGGTGGTACTGCCCAAGCGAGTCGAGCAGGTGCAAGCGCTGCTCAAGCTCTGCCATGGGCTGAATGTG CCGGTGGTCGCCAGGGGTGCCGGGACCGGCCTGTCCGGCGGCGCCCTGCCCCTGGCAAGCGGCGTGTTGCTGGTGATGGC GCGGTTCAACCAGATCCTGCACATCGACCCCGACGCCCGCACCGCACGCCTTCAGCCCGGTGTGCGCAACCTGGCGATCT CCCAGGCGGCGGCGCCGTTCGGGCTGTATTACGCGCCGGATCCCTCGTCGCAGATCGCCTGTTCCATCGGCGGCAACGTC GCGGAAAATGCCGGCGGCGTGCACTGCCTCAAGTACGGCCTGACGGTGCACAACCTGTTGAAGCTGGAAATCCTCACCAT CGAAGGCGAGCGCCTGACCCTCGGCAGCGAAGCCCTGGACTCGCCGGGCCTGGACCTGCTGGCGCTGTTCACCGGTTCCG AAGGTTTGCTGGGGGTGATCACCGAAGTGACGGTCAAACTGTTGCCCCGGCCCCAGGTCGCCAAGGTGCTGCTGGCCAGT TTCGATTCGGTGGACAAGGCCGGGCGAGCGGTAGCCGACATCATCGCCGCCGGGATCATCCCCGGCGGCCTGGAAATGAT GGACAACCTGGCGATCCGCGCCGCCGAGGACTTCATCCACGCTGGTTATCCGGTGGAGGCCGAAGCGATCCTGCTGTGCG AACAGGACGGGGTAGAGGCCGATGTCCATGACGATTGCGAACGGGTCCGCCAGGTGTTGGAGCAGGCCGGGGCCACCGAG GTGCGCCAGGCGCGGGACGAGGCCGAGCGGCTGCGCTTCTGGGCCGGGCGCAAGAACGCCTTCCCGGCGGTGGGTCGCCT GGCGCCGGATTATTACTGCATGGACGGCACCATCCCGCGACGTGCCCTGCCCGAGGTACTGCAGCGCATCGCCAGCCTCG GTGCCGAGCATGGCCTGCGCGTCGCCAACGTTTTTCACGCCGGTGACGGCAACATGCACCCGCTGATCCTGTTCGATGCC AACCAGCCCGGCGAACTGGAGCGCGCCGAAACCCTGGGCGGGAAAATCCTCGAACTGTGTGTCCAGGTAGGTGGCAGCAT CACTGGCGAACACGGTGTCGGCCGGGAAAAAATCAATCAGATGTGCACGCAATTCAACAGCGACGAACTGAACCTGTTCC ACGCGGTGAAAGCAGCTTTCGATCCCCAAGGCCTGCTCAACCCCGGCAAGAACATCCCCACCCTGCACCGCTGCGCCGAA TTCGGGGCCATGCACATCCATGGCGGGCAACTGCCGTTTCCTGAACTGGAGCGTTTCTGA Protein sequence : MNILYDEHLDGPLPKVDKQALLQALQAQVPDLDILHQEEDLKPYECDGLSAYRTTPLLVVLPKRVEQVQALLKLCHGLNV PVVARGAGTGLSGGALPLASGVLLVMARFNQILHIDPDARTARLQPGVRNLAISQAAAPFGLYYAPDPSSQIACSIGGNV AENAGGVHCLKYGLTVHNLLKLEILTIEGERLTLGSEALDSPGLDLLALFTGSEGLLGVITEVTVKLLPRPQVAKVLLAS FDSVDKAGRAVADIIAAGIIPGGLEMMDNLAIRAAEDFIHAGYPVEAEAILLCEQDGVEADVHDDCERVRQVLEQAGATE VRQARDEAERLRFWAGRKNAFPAVGRLAPDYYCMDGTIPRRALPEVLQRIASLGAEHGLRVANVFHAGDGNMHPLILFDA NQPGELERAETLGGKILELCVQVGGSITGEHGVGREKINQMCTQFNSDELNLFHAVKAAFDPQGLLNPGKNIPTLHRCAE FGAMHIHGGQLPFPELERF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 3e-177 | 80 |
