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Name : PSEBR_a5380 (PSEBR_a5380) Accession : YP_004356890.1 Strain : Pseudomonas brassicacearum NFM421 Genome accession: NC_015379 Putative virulence/resistance : Virulence Product : type III secretion protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4791 EC number : - Position : 6499649 - 6500446 bp Length : 798 bp Strand : - Note : - DNA sequence : ATGACGGCCCAGGCTTTCGGCCCGTATTTCGACTTGCTGCTGTCGATCGCGCTTGGCATGGCGCGCATTTACCCGGTCGC ATACCTGGTCCCGGTATTTTGCTTCCAACACCTGCGAGGCTTGCCGCGCCATGCCGTTGTGTTTGCCCTGGGCATGTTGC CGGCGCCGGGTATTCGCCAGGCGCTGATCGACGCCCAGGTCAATTGGCTGTCGCTGGCCGGGTTGATGTTCAAGGAGCTG GTGCTGGGCTTCTTGCTCGGGGTGCTGCTGGCGATGCCGTTCTGGTTGTACGAGTCGGTGGGTGCCTTGCTGGACAACCA GCGCGGTGCGCTCATTGGTGGCCAGTTGAACCCGGCGCTCGGCAGCGACACCACGCCCCTGGGCCTGCTGTTCAAGGAGA TGACGATTTTGCTGCTGGTCACCACCCTGGGCATTGGCACGTTGACCCAGGTGATCTGGGACAGCTACCTGGTGTGGTCG CCAACCGTTTGGTTTCCATTGCCTGGCGCGGACGGCTTCGGCGTGTTTCTCGGGCTGCTCGGCGAAATGTTCATGCACAT GATGCTCTATGCGGCGCCCTTTATCGGCTTGCTGTTGCTGGTGGAGTTCAGCCTGGCGTTGCTCAGCCTGTATAGCCCGC AATTGCAGGTGTTCGTCCTCGCCATGCCGGCCAAGAGCCTGATCGGCCTGGGCTTCCTGCTGTTCTACCTGCCCACGCTG TGGGATGCGATGACGGGCCGTCTTGGTCGCTATGGCGAAATCCGGCATCTGCTGCACCTGTTGTTGCCGTCACCCTGA Protein sequence : MTAQAFGPYFDLLLSIALGMARIYPVAYLVPVFCFQHLRGLPRHAVVFALGMLPAPGIRQALIDAQVNWLSLAGLMFKEL VLGFLLGVLLAMPFWLYESVGALLDNQRGALIGGQLNPALGSDTTPLGLLFKEMTILLLVTTLGIGTLTQVIWDSYLVWS PTVWFPLPGADGFGVFLGLLGEMFMHMMLYAAPFIGLLLLVEFSLALLSLYSPQLQVFVLAMPAKSLIGLGFLLFYLPTL WDAMTGRLGRYGEIRHLLHLLLPSP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcT | ABQ88361.1 | HrcT | Virulence | Hrp PAI | Protein | 4e-50 | 55 |
| hrpX | AAB05077.1 | HrpX | Virulence | Hrp PAI | Protein | 4e-50 | 55 |
| hrcT | AAT96345.1 | HrcT | Virulence | S-PAI | Protein | 5e-53 | 54 |
| hrcT | AAT96264.1 | HrcT | Virulence | S-PAI | Protein | 3e-53 | 54 |
| hrcT | AAT96305.1 | HrcT | Virulence | S-PAI | Protein | 3e-53 | 54 |
| hrcT | NP_791220.1 | type III secretion protein HrcT | Virulence | Hrp PAI | Protein | 5e-51 | 54 |
| hrcT | AAG33886.1 | HrcT | Virulence | Hrp PAI | Protein | 4e-51 | 54 |
| hrcT | AAT96148.1 | HrcS | Virulence | T-PAI | Protein | 7e-50 | 54 |
| hrcT | AAT96202.1 | HrcT | Virulence | T-PAI | Protein | 7e-50 | 54 |
| hrcT | ABA47281.1 | HrcT | Virulence | S-PAI | Protein | 8e-53 | 53 |
| hrcT | AAB06007.1 | HrcT | Virulence | Hrp PAI | Protein | 1e-45 | 52 |
