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Name : PSEBR_a918 (PSEBR_a918) Accession : YP_004352091.1 Strain : Pseudomonas brassicacearum NFM421 Genome accession: NC_015379 Putative virulence/resistance : Unknown Product : Sec protein secretion system subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1176438 - 1178306 bp Length : 1869 bp Strand : + Note : - DNA sequence : ATGCTGAACAAATACCCTCTGTGGAAATATGTACTGATCCTGGCGGTGCTGGCGGTCGGTCTGATTTATTCCGCTCCCAA TCTATACCCGGATGACCCGGCCATTCAGGTCAGTGGCGCAAGCACTGCGCTGCAGGTCACCCAGGCCGATCTGGACCGTG CGAGCGCTGCGCTCAAAGCGTCCAATATCGAGGTCAAGGCTGCGTCCATCGCCGAAAACGGCAAGGGCGGCCTGTTGCGT CTGGCCAAGGCCGAAGACCAACTGCCAGCCAAGGACGTGGTGCGCAAGGCGTTGGGCGACGATTACGTTGTGGCCCTGAA CCTGGCCCAGACCACCCCGCAATGGCTGCGCAAGCTCGGCGCGCATCCGATGAAGCTGGGTCTGGACTTGTCCGGCGGTG TGCACTTCCTGCTGGAAGTGGACATGGAAAAAGCCCTCGACGCGCGACTGAAAGTCTACGAAGGCGACGTCAAGAGCTTG CTGCGTAAAGAGCGCGTGCGTTATCGCAGCCTGCCGCAACTCGACGGTGCCATTCAGTTGGGCTTCAGCGATACCGATAC CCGCGAGCAGGCCCGTAGCCTGATCCGCAAGAACTTCAATGATTTCGACGTTGTGCCGGCCGACCTCAATGGTCAGCCAG TGCTGCGTCTGGCGATGACCCCGGCCAAGCTGGCGGAAATCCGCGAATACTCCATCAAGCAGAACTTGACCACGGTGCGT AACCGCGTCAACGAGCTGGGTGTGGCCGAGCCGATCGTGCAGCGCCAGGGCGCCAACCGCATCGTGGTTGAGCTGCCAGG CGTGCAGGACACTGCCGAAGCCAAGCGTATCCTCGGCAAGACCGCCAACCTGGAATTCCGTCTGGCCGCTGAGCCGGGTG CTTCCAAGGCGACTTCCGAGAGCTTCGAGTTCCGTGAGGGCAATCGGCCGGCGGCGCAGATCGAGCGTGGCCTGATCATC ACCGGTGACCAGGTGACTGACGCCAAGGCGGGCTTCGACGAGCAGGGTCGCCCACAGGTGAACATTCGCCTCGACGGCCA TGGCGGCGAACTGATGAGCCGCGCTACGCGCAGCAACGTCGGTCGCAGCATGGCGGTGATCTTCATCGAGCAGAAGCCGA CCACCACTTACACCAAGCAAGTGGTCAACGGCGTCGAGAAAGACGTCGCGGTGCAGACCTTCAAGGAAGAGAAGAAGATC ATCAGCCTGGCGACCATCCAGTCGCCACTGGGCAGCCAGTTCCGCATCACCGGCCTGAACGGCCAGGGTGAATCCTCGGA ACTGGCCCTGCTGCTGCGTGCCGGTGGTCTGGCCGCGCCAATGTACTTCGCTGAAGAGCGCACCATTGGCCCGAGCCTGG GTGCCGACAACATCACCAAGGGTATCGATGCTTCGCTGTGGGGCATGCTGTTCGTGTCGCTGTTCATCATCGCCATCTAC CGCTTCTTCGGCATCATCGCCACCGTCGCGCTGGCAGTGAACATGGTGATGCTGCTGGCCTTGATGTCGCTGCTGGGTGC CACGCTGACCCTGCCGGGTATCGCCGGTATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGC GGATACGTGAAGAGATCGCCGCGGGCATGACGATTCAACGGGCAATCAACGAAGGCTTCGGCCGGGCATTCACCGCGATC CTCGACGCCAACCTGACCACGTTGCTGGTCGGCGGGATTCTCTTCGCCATGGGCACCGGCCCGGTCAAGGGCTTCGCAGT GACCATGTCCCTCGGGATCTTTACCTCGATGTTCACAGCCATCATGGTGACCCGCGCAATGGTCAACCTGATCTTTGGCG GTCGTGACTTCAAGAAGTTGTGGATTTAA Protein sequence : MLNKYPLWKYVLILAVLAVGLIYSAPNLYPDDPAIQVSGASTALQVTQADLDRASAALKASNIEVKAASIAENGKGGLLR LAKAEDQLPAKDVVRKALGDDYVVALNLAQTTPQWLRKLGAHPMKLGLDLSGGVHFLLEVDMEKALDARLKVYEGDVKSL LRKERVRYRSLPQLDGAIQLGFSDTDTREQARSLIRKNFNDFDVVPADLNGQPVLRLAMTPAKLAEIREYSIKQNLTTVR NRVNELGVAEPIVQRQGANRIVVELPGVQDTAEAKRILGKTANLEFRLAAEPGASKATSESFEFREGNRPAAQIERGLII TGDQVTDAKAGFDEQGRPQVNIRLDGHGGELMSRATRSNVGRSMAVIFIEQKPTTTYTKQVVNGVEKDVAVQTFKEEKKI ISLATIQSPLGSQFRITGLNGQGESSELALLLRAGGLAAPMYFAEERTIGPSLGADNITKGIDASLWGMLFVSLFIIAIY RFFGIIATVALAVNMVMLLALMSLLGATLTLPGIAGIVLTMGMAVDANVLIFSRIREEIAAGMTIQRAINEGFGRAFTAI LDANLTTLLVGGILFAMGTGPVKGFAVTMSLGIFTSMFTAIMVTRAMVNLIFGGRDFKKLWI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 89 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 89 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 89 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 89 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 89 |
