Gene Information

Name : bgla_1g02850 (bgla_1g02850)
Accession : YP_004358937.1
Strain :
Genome accession: NC_015381
Putative virulence/resistance : Unknown
Product : DNA-directed RNA polymerase subunit beta
Function : -
COG functional category : K : Transcription
COG ID : COG0085
EC number : -
Position : 329016 - 333125 bp
Length : 4110 bp
Strand : +
Note : -

DNA sequence : 
ATGCAATATTCCTTCACCGAGAAGAAGCGTATTCGCAAGAGTTTCGCGAAGCGCTCCATCGTTCACCAAGTTCCTTTCCT
GCTAGCTACTCAGCTTGAATCATTCAGCACGTTTCTGCAAGCTGAAGTGTCTGCAGCACAACGCAAGTCCGAAGGCCTGC
AAGCCGCCTTCACCTCTGTTTTCCCGATCGTTTCGCACAATGGCTTCGCTCGTCTCGAGTTCGTGAGCTATGCCCTGTCG
TCGCCGGCATTCAACATCAAGGAATGCCAGCAGCGCGGCCTGACCTATTGCTCGGCACTGCGCGCCAAGGTGCGCCTAGT
GCTGCTCGACAAGGAATCGCCGAGCAAGCCGGTGGTCAAGGAAGTGAAGGAGCAGGAAGTGTACATGGGCGAGATTCCGC
TCATGACGCCGACCGGCTCGTTCGTCATCAACGGTACCGAGCGCGTGATCGTGTCGCAGCTCCACCGTTCCCCGGGCGTG
TTCTTCGAACACGACAAGGGCAAGACCCACAGCTCGGGCAAGCTGCTGTTCTCGGCGCGGATCATTCCCTACCGCGGCTC
GTGGCTCGACTTCGAATTCGACCCGAAGGACATCCTGTACTTCCGCGTCGACCGTCGCCGCAAGATGCCGGTGTCGATCC
TGCTGAAGGCCATCGGCCTGACGCCGGAACAGATCCTCGCGAACTTCTTCGTGTTCGACAACTTCACGTTGATGGACGAA
GGCGCGCAGATGGAGTTCGTGCCCGAACGCCTGCGTGGCGAAGTCGCGCGTTTCGACATCAGCGATCGCGATGGCAAGGT
CATCGTCCAGAAGGACAAGCGGATCAACGCGAAGCACATCCGTGACCTGGAAGCCGCGAAGACCAAGTTCATCTCGGTGC
CGGAAGACTACCTGCTCGGCCGCGTGCTGGCGAAGAACGTGGTCGACGGCGACACCGGCGAAGTGATCGCGAACGCGAAC
GACGAGATCACCGAGAGCGTGCTGGACAAGCTGCGCGACGCGAAGATCAAGGAAATCCAGACGATCTACACGAACGATCT
GGACCAGGGTCCGTACATCTCCTCGACGCTGCGCGTCGACGAGACGGCCGACAAGACGGCCGCGCGTATCGCCATCTACC
GCATGATGCGCCCGGGCGAGCCGCCGACGGAGGAAGCCGTCGAGGCGCTGTTCAACCGTCTGTTCTACAGCGAAGACGCC
TACGACCTGTCGAAGGTCGGCCGCATGAAGTTCAACCGCCGCGTGGGCCGTGACGAGATCGTCGGCCCGATGACGCTGCT
GGACGACGACATCCTCGCGACCATCAAGATCCTGGTCGAGCTGCGCAACGGCAAGGGCGAAGTGGACGATATCGACCACC
TCGGCAACCGTCGCGTGCGTTGCGTCGGCGAACTGGCGGAGAACCAGTTCCGTGCCGGCCTGGTGCGTGTGGAACGCGCG
GTGAAGGAACGCCTCGGCCAGGCCGAAAGCGAAAACCTGATGCCGCACGACCTGATCAACTCGAAGCCGATTTCCTCGGC
GATCCGCGAGTTCTTCGGTTCGTCGCAGCTCTCGCAGTTCATGGACCAGACCAACCCGCTGTCGGAAATCACGCACAAGC
GCCGTGTTTCCGCACTGGGCCCGGGCGGCCTGACGCGCGAGCGCGCCGGCTTCGAAGTCCGTGACGTGCACCCGACCCAC
TATGGCCGCGTGTGCCCGATCGAAACGCCGGAAGGTCCGAACATCGGCCTGATCAACTCGCTGGCGCTGTACGCCCACCT
GAACGAATACGGCTTCCTCGAGACGCCGTACCGCAAGGTGACGGACAGCAAGGTGACCGACCAGATCGACTACCTGTCGG
CGATCGAGGAAGGCCGCTACGTGATCGCCCAGGCGAACGCCTCGGTGGACGAGAACACGGGCGAGCTGACCGACGAACTG
GTGTCGGCGCGTGAAGCGGGCGAAACCATGATGGTCACGCCGGACCGCATCCAGTACATGGACGTGGCGCCGTCGCAGAT
CGTCTCGGTGGCCGCATCGCTGATCCCGTTCCTCGAGCACGATGACGCGAACCGTGCACTGATGGGCTCGAACATGCAGC
GCCAGGCCGTGCCTTGCCTGCGTCCGGAAAAGCCGGTGGTCGGCACGGGCATCGAGCGCACCTGCGCGGTCGACTCGGGC
ACCACGGTCCAGGCCTATCGCGGCGGCGTGGTCGACTATGTCGATGCGGGCCGTATCGTGATTCGCGTGAACGACGACGA
AGCGGTGGCGGGTGAGGTCGGTGTCGACATCTACAACCTCATCAAGTACACGCGTTCGAACCAGAACACGAACATCAACC
AGCGTCCGATCGTGAAGATGGGCGACAAGGTCGCGCGCGGTGACGTGCTGGCCGACGGCGCCTCGACGGACCTGGGCGAG
CTCGCGCTCGGCCAGAACATGCTGATCGCGTTCATGCCGTGGAACGGCTACAACTTCGAGGATTCGATCCTGATCTCGGA
GAACGTGGTGGCGGACGATCGCTACACGTCGATCCACATCGAAGAGCTGAACGTGGTCGCTCGCGACACCAAGCTCGGAC
CGGAAGAAATCACGCGCGACATCTCGAACCTGGCGGAAATCCAGCTCGGCCGTCTCGATGAATCGGGCATCGTCTACATC
GGTGCCGAGGTCGAAGCGGGCGACGTGATGGTCGGCAAGGTCACGCCGAAGGGCGAGACCCAGCTGACGCCGGAAGAGAA
GCTGCTGCGCGCGATCTTCGGCGAGAAGGCCTCGGACGTGAAGGACACCTCGCTGCGCGTGCCCTCGGGCATGAGCGGCA
CGGTGATCGACGTGCAGGTGTTCACGCGCGAAGGCATCGTGCGTGACAAGCGCGCGCAACAGATCATCGACGACGAACTG
AAGCGCTACCGCCTCGACCTGAACGACCAGCTGCGTATCGTGGAAGGCGATGCCTTCCAGCGTCTGGCGCGCATGCTCGA
CGGCAAGGTCGCCAACGGCGGCCCGAAGAAGCTGGCCAAGGGCACCAAGATCGACCAGGCCTACCTGTCGGATCTGGACC
ACTACCACTGGTTCGACATCCGCCTGGCGGACGAGGAAGCGGCGGCCCAGCTCGAAGCGATCAAGAACTCGATCGAGGAG
AAGCGCCACCAGTTCGACCTGGCTTTCGAGGAGAAGCGCAAGAAGCTCACGCAAGGCGATGAACTGCCGCCGGGCGTGCT
GAAGATGGTCAAGGTCTACCTCGCGGTCAAGCGTCGCCTGCAGCCTGGCGACAAGATGGCGGGTCGTCACGGTAACAAGG
GCGTGGTCTCGAAGATCGTGCCGGTGGAAGACATGCCGTACATGGCCGACGGCCGTCCGGCCGACGTCGTGCTGAACCCG
CTCGGCGTGCCGTCGCGGATGAACGTGGGCCAGGTGCTCGAAGTCCATCTCGGCTGGGCCGCGAAGGGCCTCGGCTGGCG
GATCGGCGAAATGCTGGCGCGCCAGGCGAAGATCGAGGAACTGCGTGTGTTCCTGACCAAGATCTACAACGAGTCGGGCC
GCGCGGAAGACCTCGAGAGCTTCAGCGACGACGAGATCCTCGAACTCGCGAAGAACCTGCGCGAGGGCGTTCCGTTCGCC
ACGCCGGTGTTCGACGGCGCGACCGAAGAGGAAATGTCGAAGATGCTCGACCTGGCGTTCCCGGACGACATCGCGCAGCA
GCTCGGCATGACGCCGTCGAAGAACCAGGTGCGCCTGTACGACGGCCGCACGGGTGAGGCATTCGAGCGGACCGTGACGG
TCGGCTACATGCACTACCTGAAGCTGCACCACTTGGTCGACGACAAGATGCACGCGCGTTCGACCGGCCCGTACTCGCTC
GTCACGCAGCAGCCGCTGGGCGGCAAGGCGCAGTTCGGTGGCCAGCGTTTCGGGGAAATGGAAGTGTGGGCGCTCGAGGC
CTACGGCGCATCGTATGTGCTGCAGGAAATGCTGACGGTGAAGTCGGACGACGTGAACGGCCGGACGAAGGTGTACGAGA
ACCTCGTCAAGGGCGACCACGTGATCGACGCGGGCATGCCGGAATCCTTCAACGTGCTGGTGAAGGAAATCCGCTCGCTC
GGTATCGACATCGACCTCGATCGCAACTAA

Protein sequence : 
MQYSFTEKKRIRKSFAKRSIVHQVPFLLATQLESFSTFLQAEVSAAQRKSEGLQAAFTSVFPIVSHNGFARLEFVSYALS
SPAFNIKECQQRGLTYCSALRAKVRLVLLDKESPSKPVVKEVKEQEVYMGEIPLMTPTGSFVINGTERVIVSQLHRSPGV
FFEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDILYFRVDRRRKMPVSILLKAIGLTPEQILANFFVFDNFTLMDE
GAQMEFVPERLRGEVARFDISDRDGKVIVQKDKRINAKHIRDLEAAKTKFISVPEDYLLGRVLAKNVVDGDTGEVIANAN
DEITESVLDKLRDAKIKEIQTIYTNDLDQGPYISSTLRVDETADKTAARIAIYRMMRPGEPPTEEAVEALFNRLFYSEDA
YDLSKVGRMKFNRRVGRDEIVGPMTLLDDDILATIKILVELRNGKGEVDDIDHLGNRRVRCVGELAENQFRAGLVRVERA
VKERLGQAESENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTH
YGRVCPIETPEGPNIGLINSLALYAHLNEYGFLETPYRKVTDSKVTDQIDYLSAIEEGRYVIAQANASVDENTGELTDEL
VSAREAGETMMVTPDRIQYMDVAPSQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRPEKPVVGTGIERTCAVDSG
TTVQAYRGGVVDYVDAGRIVIRVNDDEAVAGEVGVDIYNLIKYTRSNQNTNINQRPIVKMGDKVARGDVLADGASTDLGE
LALGQNMLIAFMPWNGYNFEDSILISENVVADDRYTSIHIEELNVVARDTKLGPEEITRDISNLAEIQLGRLDESGIVYI
GAEVEAGDVMVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVQVFTREGIVRDKRAQQIIDDEL
KRYRLDLNDQLRIVEGDAFQRLARMLDGKVANGGPKKLAKGTKIDQAYLSDLDHYHWFDIRLADEEAAAQLEAIKNSIEE
KRHQFDLAFEEKRKKLTQGDELPPGVLKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSKIVPVEDMPYMADGRPADVVLNP
LGVPSRMNVGQVLEVHLGWAAKGLGWRIGEMLARQAKIEELRVFLTKIYNESGRAEDLESFSDDEILELAKNLREGVPFA
TPVFDGATEEEMSKMLDLAFPDDIAQQLGMTPSKNQVRLYDGRTGEAFERTVTVGYMHYLKLHHLVDDKMHARSTGPYSL
VTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVKSDDVNGRTKVYENLVKGDHVIDAGMPESFNVLVKEIRSL
GIDIDLDRN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00346 YP_008207811.1 DNA-directed RNA polymerase, beta subunit/140 kD subunit Not tested AbaR25 Protein 0.0 65
BJAB0868_00350 YP_008211676.1 DNA-directed RNA polymerase, beta subunit/140 kD subunit Not tested AbaR26 Protein 0.0 65

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta CP002695.1.gene18.p0 Protein 0.0 82
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta NC_008702.1.4609796. Protein 0.0 77
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta NC_011035.1.6448762. Protein 0.0 74
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta NC_002516.2.881699.p Protein 0.0 68
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta CP001918.1.gene250.p Protein 0.0 66
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta NC_002695.1.914942.p Protein 0.0 66
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta CP000034.1.gene3741. Protein 0.0 66
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta CP000647.1.gene4402. Protein 0.0 66
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta NC_009085.4918494.p0 Protein 0.0 66
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta CP000675.2.gene392.p Protein 0.0 66
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta CP004022.1.gene2794. Protein 0.0 65
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta CP001138.1.gene4362. Protein 0.0 65
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta NC_010611.6233925.p0 Protein 0.0 65
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta NC_011595.7060572.p0 Protein 0.0 65
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta NC_010410.6003841.p0 Protein 0.0 65
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta NC_011586.7046027.p0 Protein 0.0 65
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta NC_010400.5987325.p0 Protein 0.0 65
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta AM180355.1.gene120.p Protein 0.0 46
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta NC_010079.5776819.p0 Protein 0.0 45
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta NC_007622.3792928.p0 Protein 0.0 45
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta NC_002745.1123305.p0 Protein 0.0 45
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta NC_007795.3920377.p0 Protein 0.0 45
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta NC_009632.5315067.p0 Protein 0.0 45
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta NC_009487.5169226.p0 Protein 0.0 45
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta NC_009782.5559150.p0 Protein 0.0 45
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta NC_002953.2862188.p0 Protein 0.0 45
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta NC_002952.2860169.p0 Protein 0.0 45
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta NC_007793.3914836.p0 Protein 0.0 45
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta NC_003923.1002608.p0 Protein 0.0 45
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta NC_013450.8613267.p0 Protein 0.0 45
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta NC_009641.5330265.p0 Protein 0.0 45
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta NC_002758.1120515.p0 Protein 0.0 45
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta AE016830.1.gene3155. Protein 0.0 45
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta NC_002951.3236234.p0 Protein 0.0 44
bgla_1g02850 YP_004358937.1 DNA-directed RNA polymerase subunit beta NC_012469.1.7686402. Protein 6e-175 43