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Name : Desac_1463 (Desac_1463) Accession : YP_004370499.1 Strain : Desulfobacca acetoxidans DSM 11109 Genome accession: NC_015388 Putative virulence/resistance : Unknown Product : DNA-directed RNA polymerase subunit beta Function : - COG functional category : K : Transcription COG ID : COG0085 EC number : - Position : 1668097 - 1672257 bp Length : 4161 bp Strand : - Note : COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; HAMAP: DNA-directed RNA polymerase, beta subunit, bacterial-type; InterProIPR010243:IPR007644:IPR007642:IPR007645:IPR 019462:IPR007120:IPR007641; KEGG: sfu:Sfum_1549 DNA-directed RNA p DNA sequence : ATGGCTGAGGTCTTCTCACCTCAAAAATTGTATCGCAAAAATTTTGGCAAAATAGAAAGGATTATCGACATCTCAAATCT CATCGAGATGCAGAAAGAATCCTATAATAGATTCCTCCAGAAAGATACGCCTCCGGAACAGAGAGGCGAGTTCGGATTGC AGGGGGTATTCAAGAGTGTCTTCCCGATCACGGATTACAGCGGTGCCGCCTCCCTGGAATTTGTTAACTACAGTTTTGCC GAACCGAAGTATGATGAGGAAGAGTGCCTACAGCGGGGCATGACCTTTGAAGCACCGATGAAACTGACCGTGCGTCTGGT GGTCTATGACGTCGAGTCGGAAACCAAGATGCAATCTATCCGGGATATCAAGGAACAGGAAATTTATTTTGGCACCATGC CCTTGATGACGGATAACGGTACTTTCATCGTCAACGGTACTGAACGCGTTATTGTCAGCCAACTCCATCGTTCTCCGGGT CTGTTTATCGATCACGATCGAGGCAGGACCCACTCCAGCGGCAAGCTCCTCTATTCGGCCCGTTTAATACCGATGCGGGG TTCCTGGATTGATTTTGAATTTGATCCGAAAGATATTTTATACGCCCGCATAGACCGCCGACGGAAATTCCCGGTTACGG TATTGCTCAAGGCCTTGGGTTATTCTACCGAAGAACTACTTAACTTTTTTTATAAAACCGAAAAAGTATTTCTAGACTCC GAAGGCATTGAAAAAAAATTCAATCCCGAGTTTCTGCTGCAACGCAAAGTCTCAATGGATATCGTGGACCCTAGCACAGG GGAATTATTGGTCAAAAAGAACAAAAAGATCACCCCGGAACTCATCCGCAAACTGCAGAAAGCGGGTGTAGAACGGTTGT CCCTAATGCCGGGTGAAATAATCGGTCGAGTAGTGGCTCACGATATCTTGGACACCGAAAACGGCGAGGTGCTGATTAAC TGTAACGAACCAGTGACCGAGGAAAAACTCGACCGTCTGCGCCAGCGCCGCATCCGTGAGATTGACGTCCTCTACATCGA AGGCATCAATGTCAGCCCCTGCCTCCGTAACACTTTGGCGGTGGATAAGACCGGCAGCACACGTGAGGCCATCTTTGAAA TCTATCGGAAACTCCGTCCCGGCAATCCGCCAACTCTGGAGGTAGCAGCCAATTTCTTCGACAACCTCTTTTTTCGCCCG GAATATTACGACTTATCTCCGGTCGGACGTCTGAAGCTGAACCTCAAGTTGAAACGCGAGGCGCCGGTTACTCAGAGTAC GTTGGATAAAGAAGACATACTGTTTGCCGTCAGGGAGCTCATTACCCAAAAAGAACTCGAAGGCCCCATTGACGATATCG ATCATTTAGGCAATCGTCGGGTTCGGGCCGTCGGTGAACTGTTGGAAAATCAATACCGTATCGGCCTGGTGCGAATGGAG CGGGCCATTAAGGAGCGTATGAGTCTTCAGGAAATCGACGCCCTGATGCCCCATGATCTGATCAACGCCAAACCGGTGTC GGGAGTGGTGAAAGAATTTTTTGGCACCAGCCAACTATCCCAATTTATGGACCAGACCAACCCGTTGTCAGAGATCACTC ACAAACGCCGTCTGAGTGCTTTAGGACCCGGCGGCTTGACTCGGGAACGGGCGGGATTTGAGGTGCGTGACGTCCACCCG ACTCACTACGGCCGCATCTGCCCCATTGAAACCCCGGAAGGTCCAAATATCGGCCTGATCGTCTCTTTATCCACCTATGC CCGGGTAAATGAATTCGGCTTTATCGAAACCCCTTACCGCGTGGTGGAAAAGAAAGAAGAAAATGGCGTTTGGAGCGTAC ATGTTTCTCGCCAGATAAAATTCTTGAGTGCCTTGGATGAAGGCGATAATGTTATCGCCCAAGCGAATGCCCCTCTTGAT CAGGACAGCAGATTTATCAACGACCTGATCTCGGCCCGGCAGGCGGGTGAATCTATCATGGTTCGACCGGAAGAAGTTGA TTACATGGATGTCTCGCCCAGCCAGTTGGTCAGCGTCGCGGCCTCTCTCATCCCGTTCCTCGAAAACGATGACGCCAACC GGGCGCTCATGGGTTCTAACATGCAGAGACAGGCCGTTCCGCTCTTAACCTGTACTCCACCCCTCATCGGTACCGGTTTG GAAAACGTCGTGGCCCGGGATTCTGGCGTTACCCTTGTGGCTAAACGCAGCGGCATCGTCGAAGTGGTGGATGGCACCCG TATCGTCGTGCGCGCTTATAATGGCGATGAGGGAGATTCCCAATCAATTGTTGACATTTACAAACTGACAAAATTCCAGC GTACCAATCAAAACACCTGTTTTAATCAGAGGCCCATCGTCAAACCCGGCGATCGGGTGGAAAAAGGCCAGATCATCGCT GACGGTCCGGCTACGGCCTTTGGGGAACTAGCCTTGGGCAAGAACGTTATGGTAGCTTTTATGCCCTGGGGCGGGTACAA CTTTGAAGATTCCATCCTCGTTAGTGAACGCATTGCCAAGGAAGACGTCTTCACCTCCGTTCATATTGAAGAGTTTGAGG TCGTCGCCCGCGACACAAAACTCGGCAAGGAAGAAATCACCCGAGACATCCCCAACGTGAGTGAAGAGGCCCTGGCCAAT CTCGATGAAAGCGGCATAATCCGTATCGGGGCCGAAATTAAACCAGGAGACATCTTAGTAGGCAAGGTAACTCCTAAAGG GGAAACCCAGCTTTCTCCGGAGGAAAAGCTGCTGCGCGCTATTTTCGGTGAAAAGGCCGGTGATGTCCGCGATACCTCCC TGCGAGTTCCCCCTGGTATAGAAGGAATTATTATTGATGCCCGGATCTTCTCACGCAAGGGAGTTGAAAAAGATGAGCGC AGCCGAGCCATCGAAGCGGAGGCCATTGCCAAACTTCAAAAAGACCAAGGCGATGAAATTTCAATCATAACCCAGAGTGT CAGCCATCGCCTTAAAGAACTTCTGGTCAACCAAACGGTCTTTGACATCCCGGATGATATTACGTCCGCCAGCTATATCC TGGAAAAAGGGGTCATTATCACCCCGGACATGGTAACCAAGCTCCCCTTGCATCATTGGCGTAATGTCTCTTTCGATAAT CCGGAACTGGAAGGCAGCGTCGATCGGCTGCTGGAAAGTTATCAGGTCCAGATTCAACAGGTAAACAATCAGTTTGAAGA AAAGATCAATCGCCTGCGCAAAGTCGATGAACTTCCGCCGGGCGTTATTAAGATGGTAAAAGTTTTCATCGCCATGAAGC GCAAGTTGGCAGTAGGCGACAAAATGGCCGGCCGACACGGCAATAAAGGCGTGGTTTCCCGGATCCTACCGGAGGAAGAC ATGCCCTACTTTGCCGACGGCACCCCGGTTGATATCGTGCTCAATCCTTTAGGGGTGCCCTCCCGCATGAATGTGGGTCA GGTTCTGGAAACCCATCTCGGGTGGGCCTCGCGTCTTTTAGGCCAGCAGATCAGACGTTTGATCGACGAATTTTATGATC TGGACGCCGTGAAAAATCGGATACGAGCCCTCTATAACAACCCCCAGGTGGACGCCTGGCTGGAGTCAGCCACCCTCGAA GATATCAGACAGTTCTGGGAAAAGTTTCATAAAGAAGGGATGTTCATGGCCTCACCGGTCTTTGACGGGGCCCTGGAGTC GGAGATCCGCGCCTGTCTAACCCAAGCGGGCGTTTCAGAAGTAGGGAAAGCAAAACTTTTCGACGGCCGCACCGGCGAAC CCTTTGACCGTAGCGTAACCGTAGGCACCATGTACATGATGAAGCTGCATCACCTGGTAGACGACAAGATCCATGCCCGC TCCATCGGACCTTATTCGCTTGTCACCCAGCAGCCGTTGGGAGGTAAGGCCCAGTTTGGCGGCCAACGTTTAGGCGAAAT GGAAGTGTGGGCCATGGAGGCATATGGCGCAGCCTACTCCTTGCAGGAATTTCTTACCGTAAAATCTGATGATGTCGCCG GCCGCACGCGCATGTACGAAAAGATTGTCAAAGGTCAATATGATTTAGAAGCCGGTTTACCTGAATCCTTTAATGTTCTT ATCCGAGAACTTCAAAGCTTGGCCCTTAATGTGGAGCTCTTGGAGGACAAGGAATCAGAGGTGGCGGAAAACCATGGATA A Protein sequence : MAEVFSPQKLYRKNFGKIERIIDISNLIEMQKESYNRFLQKDTPPEQRGEFGLQGVFKSVFPITDYSGAASLEFVNYSFA EPKYDEEECLQRGMTFEAPMKLTVRLVVYDVESETKMQSIRDIKEQEIYFGTMPLMTDNGTFIVNGTERVIVSQLHRSPG LFIDHDRGRTHSSGKLLYSARLIPMRGSWIDFEFDPKDILYARIDRRRKFPVTVLLKALGYSTEELLNFFYKTEKVFLDS EGIEKKFNPEFLLQRKVSMDIVDPSTGELLVKKNKKITPELIRKLQKAGVERLSLMPGEIIGRVVAHDILDTENGEVLIN CNEPVTEEKLDRLRQRRIREIDVLYIEGINVSPCLRNTLAVDKTGSTREAIFEIYRKLRPGNPPTLEVAANFFDNLFFRP EYYDLSPVGRLKLNLKLKREAPVTQSTLDKEDILFAVRELITQKELEGPIDDIDHLGNRRVRAVGELLENQYRIGLVRME RAIKERMSLQEIDALMPHDLINAKPVSGVVKEFFGTSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHP THYGRICPIETPEGPNIGLIVSLSTYARVNEFGFIETPYRVVEKKEENGVWSVHVSRQIKFLSALDEGDNVIAQANAPLD QDSRFINDLISARQAGESIMVRPEEVDYMDVSPSQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLLTCTPPLIGTGL ENVVARDSGVTLVAKRSGIVEVVDGTRIVVRAYNGDEGDSQSIVDIYKLTKFQRTNQNTCFNQRPIVKPGDRVEKGQIIA DGPATAFGELALGKNVMVAFMPWGGYNFEDSILVSERIAKEDVFTSVHIEEFEVVARDTKLGKEEITRDIPNVSEEALAN LDESGIIRIGAEIKPGDILVGKVTPKGETQLSPEEKLLRAIFGEKAGDVRDTSLRVPPGIEGIIIDARIFSRKGVEKDER SRAIEAEAIAKLQKDQGDEISIITQSVSHRLKELLVNQTVFDIPDDITSASYILEKGVIITPDMVTKLPLHHWRNVSFDN PELEGSVDRLLESYQVQIQQVNNQFEEKINRLRKVDELPPGVIKMVKVFIAMKRKLAVGDKMAGRHGNKGVVSRILPEED MPYFADGTPVDIVLNPLGVPSRMNVGQVLETHLGWASRLLGQQIRRLIDEFYDLDAVKNRIRALYNNPQVDAWLESATLE DIRQFWEKFHKEGMFMASPVFDGALESEIRACLTQAGVSEVGKAKLFDGRTGEPFDRSVTVGTMYMMKLHHLVDDKIHAR SIGPYSLVTQQPLGGKAQFGGQRLGEMEVWAMEAYGAAYSLQEFLTVKSDDVAGRTRMYEKIVKGQYDLEAGLPESFNVL IRELQSLALNVELLEDKESEVAENHG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 55 |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Desac_1463 | YP_004370499.1 | DNA-directed RNA polymerase subunit beta | NC_002516.2.881699.p | Protein | 0.0 | 56 |
| Desac_1463 | YP_004370499.1 | DNA-directed RNA polymerase subunit beta | NC_002695.1.914942.p | Protein | 0.0 | 55 |
| Desac_1463 | YP_004370499.1 | DNA-directed RNA polymerase subunit beta | CP000034.1.gene3741. | Protein | 0.0 | 55 |
| Desac_1463 | YP_004370499.1 | DNA-directed RNA polymerase subunit beta | NC_009085.4918494.p0 | Protein | 0.0 | 55 |
| Desac_1463 | YP_004370499.1 | DNA-directed RNA polymerase subunit beta | NC_010410.6003841.p0 | Protein | 0.0 | 55 |
| Desac_1463 | YP_004370499.1 | DNA-directed RNA polymerase subunit beta | NC_011586.7046027.p0 | Protein | 0.0 | 55 |
| Desac_1463 | YP_004370499.1 | DNA-directed RNA polymerase subunit beta | NC_010400.5987325.p0 | Protein | 0.0 | 55 |
| Desac_1463 | YP_004370499.1 | DNA-directed RNA polymerase subunit beta | NC_010611.6233925.p0 | Protein | 0.0 | 55 |
| Desac_1463 | YP_004370499.1 | DNA-directed RNA polymerase subunit beta | NC_011595.7060572.p0 | Protein | 0.0 | 55 |
| Desac_1463 | YP_004370499.1 | DNA-directed RNA polymerase subunit beta | NC_008702.1.4609796. | Protein | 0.0 | 55 |
| Desac_1463 | YP_004370499.1 | DNA-directed RNA polymerase subunit beta | CP002695.1.gene18.p0 | Protein | 0.0 | 55 |
| Desac_1463 | YP_004370499.1 | DNA-directed RNA polymerase subunit beta | CP000675.2.gene392.p | Protein | 0.0 | 55 |
| Desac_1463 | YP_004370499.1 | DNA-directed RNA polymerase subunit beta | CP001138.1.gene4362. | Protein | 0.0 | 54 |
| Desac_1463 | YP_004370499.1 | DNA-directed RNA polymerase subunit beta | CP001918.1.gene250.p | Protein | 0.0 | 54 |
| Desac_1463 | YP_004370499.1 | DNA-directed RNA polymerase subunit beta | CP004022.1.gene2794. | Protein | 0.0 | 54 |
| Desac_1463 | YP_004370499.1 | DNA-directed RNA polymerase subunit beta | CP000647.1.gene4402. | Protein | 0.0 | 54 |
| Desac_1463 | YP_004370499.1 | DNA-directed RNA polymerase subunit beta | NC_011035.1.6448762. | Protein | 0.0 | 54 |
