Gene Information

Name : peb1C (CAR_c01670)
Accession : YP_004373934.1
Strain : Carnobacterium sp. 17-4
Genome accession: NC_015391
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein PEB1C
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 167526 - 168179 bp
Length : 654 bp
Strand : +
Note : -

DNA sequence :
GTGGCTGAAGGGGAAAAAGTCGTTATCATAGGGCCTTCTGGTTCTGGAAAAAGTACCACAGTTAGATGTATGAATTTTCT
TGAGGAACCTACGACAGGAGAAGTCTATATAGAGGGCAATCAAATAACAGAAAAAAACAAATTAGAGATGGTACGAAATT
CTTCTGCAATGGTCTTTCAACAGTTCAACCTTTATCCGCATATGACGGTGTTAGGAAATCTGACAATTGGACCTATAAAA
TTACAGAATAAATCAAAAAAAGAAGCAGAAGAACTGGCTTATCGGTATCTAGATATCGTAGGGTTGCGAGAAAAAGCGAC
AGCATACCCTTCAACACTTTCAGGAGGTCAACAGCAAAGAGTTGCTATTGCTAGATCTCTCTGTTCTGAAAAGAAAATCA
TTCTATTTGATGAACCTACATCTGCTTTAGATCCAGAGACGGTTCAAGAAGTATTGGATGTGATGATCAAATTATCAAGC
ATGAATATTACAATGGTCGTTGTGACTCACGAAATGGGTTTTGCTAAACAAGTAGCTGATCGTGTTATTTTTATGGATAA
TGGAACCATTTTAGAAGTAGGGCCACCAGAACATTTCTTTGAAAATCCTACTCATGAAAGAACAAAAGAATTTTTAAGCA
AAATTTTAAGATAA

Protein sequence :
MAEGEKVVIIGPSGSGKSTTVRCMNFLEEPTTGEVYIEGNQITEKNKLEMVRNSSAMVFQQFNLYPHMTVLGNLTIGPIK
LQNKSKKEAEELAYRYLDIVGLREKATAYPSTLSGGQQQRVAIARSLCSEKKIILFDEPTSALDPETVQEVLDVMIKLSS
MNITMVVVTHEMGFAKQVADRVIFMDNGTILEVGPPEHFFENPTHERTKEFLSKILR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-21 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
peb1C YP_004373934.1 putative ABC transporter ATP-binding protein PEB1C NC_012469.1.7686878. Protein 6e-26 44