Gene Information

Name : CAR_c16730 (CAR_c16730)
Accession : YP_004375347.1
Strain : Carnobacterium sp. 17-4
Genome accession: NC_015391
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1741748 - 1742449 bp
Length : 702 bp
Strand : -
Note : -

DNA sequence : 
ATGTCTTTTGTAGAGATAAAAAATGAATTCAAACGCTATAAAATGGGCGAAACAGTTATTGCCGCAAATGATGGCATCTC
TTTTGAAATTGAACAAGGAGAATTTGCAGTGATTGTTGGACCAAGTGGTGCAGGAAAATCAACAGTTCTGAATATTTTAG
GCGGAATGGATACGGCAGATGAAGGTCAGATCCTTGTGGACGGCACAGACATTGCCAAATTCAATACAAAACAACTTACG
CAATACCGTCGAGATGATGTAGGATTTGTTTTTCAATTTTATAACTTAGTGCCAAATTTGACGGCTATTGAAAATGTGGA
GTTGGCATCTGAGATTTCCAGCAAAGCATTGGATGCCAAAAAAGTGTTAGAAGATGTTGGTTTAGGCCATCGGTTAGATA
ATTTTCCAGCACAACTATCAGGTGGGGAACAACAACGAGTTGCTATTGCTAGAGCTTTAGCAAAACAGCCTAAACTTCTT
TTATGTGATGAGCCAACTGGAGCATTAGATTATGAAACTGGAAAACAAGTATTGAAAATATTGCAAGATACTTGTAAAAA
CACAGGGACAACAGTTATTGTCATTACACATAATAAAGCAATTGCTCCAATGGCTAATCGAATGATTGAAATAAACAATG
CAAAAGTACGTAGTGTGACCATGAATGAAAACCCTATGTCCGTAGCTGACATCGAATGGTAA

Protein sequence : 
MSFVEIKNEFKRYKMGETVIAANDGISFEIEQGEFAVIVGPSGAGKSTVLNILGGMDTADEGQILVDGTDIAKFNTKQLT
QYRRDDVGFVFQFYNLVPNLTAIENVELASEISSKALDAKKVLEDVGLGHRLDNFPAQLSGGEQQRVAIARALAKQPKLL
LCDEPTGALDYETGKQVLKILQDTCKNTGTTVIVITHNKAIAPMANRMIEINNAKVRSVTMNENPMSVADIEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CAR_c16730 YP_004375347.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 1e-75 64
CAR_c16730 YP_004375347.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 6e-41 43
CAR_c16730 YP_004375347.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-38 41