Gene Information

Name : MDS_1706 (MDS_1706)
Accession : YP_004379489.1
Strain : Pseudomonas mendocina NK-01
Genome accession: NC_015410
Putative virulence/resistance : Unknown
Product : transketolase domain-containing protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3959
EC number : -
Position : 1854611 - 1855462 bp
Length : 852 bp
Strand : +
Note : -

DNA sequence : 
GTGCAGAACAATAATTCTTCCGTCCACGCCAAGGTTGCCGAAGGCGCCTACCGCATCCGTCGCTTCGCGCTGCAGATGGG
CGAGGTCCAAGGCCAAGGCTATGTCGGTCAGGCGCTGGGTTACGCCGACGTGCTGGCGACCGCCTATTGCCATGCGCTGA
ATCTGCGTCCAGAAGACCCAAGCTGGGAGGGCCGCGACCGCTTTCTGCTGTCCCACGGCCATTACGCCATTGCGTTCTAC
GCGGCGCTGATCGAGGCGAAGATCATTCCCGAGGACGAACTGGAAACCTACGGCAGCGATGACAGCCGCCTGCCCATGTC
CGGCATGGCGACCTATACCCCAGGCATGGAAATGTCGGGTGGCTCGCTCGGCCAGGGCCTGCCGATTGCCGTGGGCATGG
CGCTCGGTCTGCGTCTTAAGGGCAACCCGGCTTTCGTCTACAACTCGATGTCCGATGGCGAACTCGACGAAGGCTCGACC
TGGGAAGCCGCCATGAGCGCGGCTCACCACGGCCTGGGCAACCTGATTTGCCTGGTGGACATCAACAACCAGCAAGCCGA
TGGTCCTTCGACCAAGGTGCTGGGCTTCGAGCCGCTCGCTGACAAGTGGGCCGCGTTCGGCTGGCATGTTCAGCGTGTCG
ACGGCAACGATCTAGCCGCAGTCATCGAGGCCTTCGACACTGCGCGCAACCTCACCGAAGCCAAACCGCGCGTGATCCTC
TGCGACACCCTGATGGGCAAGGGTGTGCCATTCCTCGAAACCCGCGAGAAGAACCACTTCATTCGCGTCGACCAGGCCGA
GTGGCAGCAAGCCCTCGATATTCTCGACCAAGCCCAGGGAGCCGCCCGATGA

Protein sequence : 
MQNNNSSVHAKVAEGAYRIRRFALQMGEVQGQGYVGQALGYADVLATAYCHALNLRPEDPSWEGRDRFLLSHGHYAIAFY
AALIEAKIIPEDELETYGSDDSRLPMSGMATYTPGMEMSGGSLGQGLPIAVGMALGLRLKGNPAFVYNSMSDGELDEGST
WEAAMSAAHHGLGNLICLVDINNQQADGPSTKVLGFEPLADKWAAFGWHVQRVDGNDLAAVIEAFDTARNLTEAKPRVIL
CDTLMGKGVPFLETREKNHFIRVDQAEWQQALDILDQAQGAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96100.1 transketolase Not tested T-PAI Protein 2e-88 69
unnamed AAT96056.1 transketolase Not tested T-PAI Protein 1e-88 69
unnamed AAT96229.1 transketolase Not tested T-PAI Protein 1e-88 69
unnamed AAT96117.1 transketolase Not tested T-PAI Protein 1e-88 69
unnamed AAT96177.1 transketolase Not tested T-PAI Protein 1e-88 69