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Name : MDS_1886 (MDS_1886) Accession : YP_004379669.1 Strain : Pseudomonas mendocina NK-01 Genome accession: NC_015410 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmE Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG2332 EC number : - Position : 2067145 - 2067633 bp Length : 489 bp Strand : + Note : - DNA sequence : GTGAATCCGGTTCGCAAGAAACGCCTGTATATCGTTCTGGCCATCCTCTGTGGTGTCAGCATCGCCGTTGCGCTGGCGCT GACCGCGCTGCAGGAGAACATCAACCTGTTCTACACCCCGAGCCAGATCGCCAATGGCGAGGCGCCGGTCGATACCCGCA TTCGTGCTGGCGGCCTGGTAGAAGAGGGTTCTGTGAAGCGCTCGGCCGATTCGCTGGAGGTGGACTTCGTCGTCACCGAC GGCGCCCACGGCGTGACCATCCGCTACAGCGGCATCCTCCCGGACCTGTTCCGTGAAGGGCAGGGCATCGTTGCCCTGGG CCGCGTCAATGAAGAGGGCGTGCTGGTGGCCGACGAGGTGCTGGCCAAGCACGACGAGAACTACATGCCGCCTGAAGTCA TGCAGGCGCTGGAAAAGAGCGGGATGATGCAAAAGCACGATGAGGCCAAAGCCGCCAAGCAAGGCTACCAGCAGGAGAGC GCGCAATGA Protein sequence : MNPVRKKRLYIVLAILCGVSIAVALALTALQENINLFYTPSQIANGEAPVDTRIRAGGLVEEGSVKRSADSLEVDFVVTD GAHGVTIRYSGILPDLFREGQGIVALGRVNEEGVLVADEVLAKHDENYMPPEVMQALEKSGMMQKHDEAKAAKQGYQQES AQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cycJ / ccmE | AAN62107.1 | putative cytochrome C-type biogenesis protein CycJ | Not tested | PAGI-2(C) | Protein | 6e-34 | 52 |
| ccmE | YP_217242.1 | cytochrome c-type biogenesis protein CcmE | Not tested | SPI-12 | Protein | 1e-29 | 50 |
