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Name : MDS_0217 (MDS_0217) Accession : YP_004378000.1 Strain : Pseudomonas mendocina NK-01 Genome accession: NC_015410 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 231815 - 233314 bp Length : 1500 bp Strand : - Note : - DNA sequence : ATGAGCATTCTGTACGACGAGCGCGTCGACGGCGCACTGCCCAAGGTCGACAAGGCCGCGCTGCTGACCGAGTTGCGCCA GCACCTGCCCGACCTCGACATCCTGCACACCCAGGAAGATCTCAAGCCTTACGAGTGCGACGGCCTCTCGGCCTACCGCA CCACGCCGATGCTGGTGGTGCTGCCCGAGCGCATCGAGCAGGTCCAGCAATTGCTCAAGCTTTGCCATGCCCGTGGCGTG CCGGTGGTGGCACGCGGTGCCGGCACCGGCCTGTCCGGGGGGGCATTGCCGCTGGAGCAGGGCATTCTGCTGGTGATGGC GCGCTTCAATCAGATTCTCGAAATCAACCGCGAAGGGCGCTTCGCCCGGGTCCAGCCCGGTGTACGCAACCTGGCGATCT CCCAGGCCGCCGCGCCGTTCGATCTGTATTACGCCCCCGACCCGTCCTCGCAGATCGCCTGCTCCATCGGCGGCAACGTC GCCGAGAATGCCGGCGGCGTGCATTGCCTGAAGTACGGCCTGACCGTACACAACCTGCTCAAGGTGGACATCCTCACCGT CGAAGGCGAGTTCATGACCCTTGGCAGCGATGCCCTGGACGCGCCGGGCTTCGACCTGCTGGCGCTGTTCACCGGCTCCG AAGGCATGCTCGGCATCGTCACCGAGGTGACGGTCAAGCTGCTGCCCAAGCCGCAGGTGGCCAAGGTGCTGCTGGCGGCC TTCGACTCGGTGGAAAAGGCCGGCCGCGCCGTGGGTGACATCATCGCCGCCGGCATCATCCCCGGCGGCCTGGAGATGAT GGACAACCTGGCGATTCGCGCCGCCGAAGACTTTATTCACGCCGGTTACCCGGTGGAGGCCGAAGCCATCCTGCTCTGCG AGCTGGACGGAGTGGAGGCCGACGTCGCCGACGACTGCGAGCGCGTGCGTGAGGTGCTGGAAAAGGCCGGCGCCACCGAC GTGCGCCTGGCGCGCGACGAAGCCGAGCGGGTGAAATTCTGGGCCGGACGCAAGAACGCCTTCCCCGCAGTCGGGCGCAT CTCGCCGGACTACTACTGCATGGACGGCACCATCCCGCGCCGCGAGCTGCCCGGTGTTTTGCGCGGCATCGCCGAGCTGT CCGAGGAGTACGGCCTGCGCGTGGCCAACGTGTTCCATGCCGGCGACGGCAACATGCACCCGCTGATTCTTTTCGATGCC AACGTGCCTGGCGAGCTGGAGCGCGCCGAGACCATCGGCGGCAAGATCCTCGAACTCTGCGTCAAGGTCGGGGGCAGCAT CACCGGCGAACACGGCGTCGGCCGCGAGAAGATCAACCAGATGTGCGCGCAGTTCAACAGCGACGAGATCACCCTGTTCC ACGCGGTGAAGGCGGCGTTCGACCCGGCCGGGCTGCTCAACCCGGGCAAGAACATCCCCACCCTGCACCGCTGCGCCGAG TTCGGCGCCATGCACGTGCACCACGGCCAACTGCCCTTCCCGGAACTGGAGCGCTTCTGA Protein sequence : MSILYDERVDGALPKVDKAALLTELRQHLPDLDILHTQEDLKPYECDGLSAYRTTPMLVVLPERIEQVQQLLKLCHARGV PVVARGAGTGLSGGALPLEQGILLVMARFNQILEINREGRFARVQPGVRNLAISQAAAPFDLYYAPDPSSQIACSIGGNV AENAGGVHCLKYGLTVHNLLKVDILTVEGEFMTLGSDALDAPGFDLLALFTGSEGMLGIVTEVTVKLLPKPQVAKVLLAA FDSVEKAGRAVGDIIAAGIIPGGLEMMDNLAIRAAEDFIHAGYPVEAEAILLCELDGVEADVADDCERVREVLEKAGATD VRLARDEAERVKFWAGRKNAFPAVGRISPDYYCMDGTIPRRELPGVLRGIAELSEEYGLRVANVFHAGDGNMHPLILFDA NVPGELERAETIGGKILELCVKVGGSITGEHGVGREKINQMCAQFNSDEITLFHAVKAAFDPAGLLNPGKNIPTLHRCAE FGAMHVHHGQLPFPELERF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 0.0 | 83 |
