Gene Information

Name : MDS_2731 (MDS_2731)
Accession : YP_004380514.1
Strain : Pseudomonas mendocina NK-01
Genome accession: NC_015410
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 2989905 - 2990423 bp
Length : 519 bp
Strand : +
Note : -

DNA sequence : 
GTGTCCAGCGTTTTGCCGTCCTCATCGCTGCATGGTGATATTCAAAGGCTCTACGACAATCACCATGGCTGGCTGAAAGG
CTGGTTACGTCGTCGACTGGGTGATCGCGAACGAGCCGCCGACATTGCCCAGGACACCTTCCTGCGCCTTCTGGTGACAC
GGCGTATGCCAGAACATGGCGAAGGTCGCCGTTTTCTTGCACAGATCGCCCGCAACCTAGTCATCGACCAGTGGCGTCGG
CAGCGCATCGAGCAAGCCTATCTGGACAGCCTGGCCGCCCTGCCCGAACCCGAAACCCCGTCGCTGGAAACCCGCGCGAT
GGTCATTGAAACCTTGCTGCAGATCGATGCCATGCTCGACAGCATGCCGAGAAAAGTGCGTGAGGCCTTCTTGCTGTCAC
AGTTCGAAGGCCTGACCTACCCACAGATCGCAGTGCGACTGGAGGTTAGCGTCAGCTCGGTGCAGAAGTACATGCTGCGT
GCCATCGCCGCCTGTTACCAGGTGCTTTACGCAGAATGA

Protein sequence : 
MSSVLPSSSLHGDIQRLYDNHHGWLKGWLRRRLGDRERAADIAQDTFLRLLVTRRMPEHGEGRRFLAQIARNLVIDQWRR
QRIEQAYLDSLAALPEPETPSLETRAMVIETLLQIDAMLDSMPRKVREAFLLSQFEGLTYPQIAVRLEVSVSSVQKYMLR
AIAACYQVLYAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 8e-35 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MDS_2731 YP_004380514.1 ECF subfamily RNA polymerase sigma-24 factor VFG1049 Protein 3e-35 48