Gene Information

Name : MDS_0363 (MDS_0363)
Accession : YP_004378146.1
Strain : Pseudomonas mendocina NK-01
Genome accession: NC_015410
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 381086 - 381817 bp
Length : 732 bp
Strand : -
Note : -

DNA sequence :
ATGTCACTGCTTAACGTCACCGCACTGCACAAGTATTACGGCGAAAACCATGTGCTCAAGGGCATCGACCTCAAGGTCGA
GGAAGGCGAAGTGGTCGCCATCATCGGCCGCAGCGGCTCGGGCAAGAGCACCTTCCTGCGCACCCTCAACGGCCTGGAAT
CGATCAACGACGGTGTGATCGAAGTCGACGGCGAGTACATCGACGCCGCCCGCGCCGACCTGCGCAGCCTGCGGCAGAAG
GTCGGCATGGTGTTCCAGCAGTTCAACCTGTTCCCTCATCTCACCGTCGGCGAAAACGTCATGCTGGCGCCGCAGGTGGT
GAAGAAGACTCCGCGCGCCGAGGCCGAGCAGATCGCCCGGCAGATGCTCGAACGGGTGGGCCTGGCGGAGAAATTCGACG
CCTACCCCGAACGCCTTTCCGGCGGCCAGCAACAGCGCGTGGCCATCGCCCGCGCTCTGGCCATGTCGCCCAAGGTGCTG
CTGTGCGACGAGATCACCTCGGCGCTCGACCCGGAGCTGGTGAATGAGGTGCTGGCGGTGGTCAAGCAACTGGCCAGCGA
AGGCATGACCCTGATCATGGTCACCCACGAGATGCGCTTCGCCCGCGAAGTGGGCGACAAGCTGGTGTTCATGCACCAGG
GCAAGGTGCACGAGATCGGTGATCCGAAAGCGCTGTTCGCCGCGCCGCAGACCGAGGAGCTGCGCAACTTCATCGGTTCG
GTGAACCTGTGA

Protein sequence :
MSLLNVTALHKYYGENHVLKGIDLKVEEGEVVAIIGRSGSGKSTFLRTLNGLESINDGVIEVDGEYIDAARADLRSLRQK
VGMVFQQFNLFPHLTVGENVMLAPQVVKKTPRAEAEQIARQMLERVGLAEKFDAYPERLSGGQQQRVAIARALAMSPKVL
LCDEITSALDPELVNEVLAVVKQLASEGMTLIMVTHEMRFAREVGDKLVFMHQGKVHEIGDPKALFAAPQTEELRNFIGS
VNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MDS_0363 YP_004378146.1 ABC transporter NC_012469.1.7686878. Protein 9e-26 43