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Name : MDS_3783 (MDS_3783) Accession : YP_004381566.1 Strain : Pseudomonas mendocina NK-01 Genome accession: NC_015410 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 4157373 - 4159241 bp Length : 1869 bp Strand : - Note : - DNA sequence : ATGCTCAATAAATACCCTCTGTGGAAGTACCTGCTGATTCTGTCCGTACTGGCGATCGGCCTGGTCTACTCCATTCCCAA CCTCTATCCAGATGATCCAGCCGTGCAGATCAGTGGCGCCAGCTCGGCGCTGAGCATCCAGCAGGCGGATGTCGACCGTG CCAGCAAGGCGTTGACCGATGCCGGCATTGCCGTCAAGGCTGCCAGCATCGACGAGCGTGGCCGTGGCGGCCTGATTCGT CTGATCAAGCAGGATGACCAGTTGCCGGCCAAGGACATCGTCCGTCGGGCGCTGGGCGATGACTACGTCGTAGCGCTGAA CCTGGCGCAGACCACGCCCGATTGGCTGCGTAGCCTGGGGGCGAGCCCGATGAAGCTCGGTCTGGACCTGTCCGGTGGCG TGCACTTCCTACTGGAAGTTGACATGGACAAGGCGCTGGATGTGCGCCGCAAGGTCTATGAAGGTGAAATCAAGAGCCTG CTGCGCAAGGAGCGCGTGCGCTACCGCAGCATGCCGGAAAGCAATGGCCGCATTCAGCTCGGCTTTGCCGACAGTGATTC GCTGGACAAGGCGCAGCGCCTGATTCGTAAGGATTACAGCGATTTCGAACTGACCACTGTCGAGCGCAATGGTCAGCAGA TTCTGCAGCTGGGTCTGACCCAGGCGAAGATCGCCGAGATTCGCGAATATTCCATTCGCCAGAACCTCACCACCGTGCGT AACCGCGTCAACGAACTCGGCGTGGCCGAGCCGCTGGTTCAGCGCCAGGGTGCCAGCCGCATCGTCGTCGAGCTGCCTGG TGTCCAGGACACCGCCGAAGCCAAGCGTATTCTCGGCAAGACCGCGAACCTGGAGTTTCGTCTGCAGGCCGACTTCGACG CGCCGCGCGGTGCGACCGAGGCTTTCGGCTTCCGCGAGGAAGGCCGTCCGCCGGTACAGCTCGAGCGTGAGCTGATCATC ACCGGTGACCAGGTCACCGACGCTCAGGCGAGCTTCGACGAGAATGGTCGTCCGCAGGTGAACATTCGCCTCGACGGTCA TGGCGGCGACTTGATGAATCGCGCCACGCGCAACAATGTCGGCCGCAGCATGGCGGTGATCTTCATCGAACAGAAGCCGG TCACCCGCTACGTGCGTCAGAACGTCGACGGCGTCGAGCAGGAAGTCGCCGTCTCTTCGTTCGTCGAAGAGAAGAAGATC ATCAGTCTGGCGACCATCCAGTCCGCGCTGGGCAGCCAGTTCCGTATCACCGGCCTGAACGGCCAGGGCGAGTCTTCGGA ACTGGCGCTGCTGCTGCGTGCAGGTGGTCTGGCCGCGCCGATGTACTTCGCCGAAGAACGCACCATCGGCCCGAGTCTGG GGGCCGAGAACATCGCCAAGGGTATCGCCTCTACCGAGTGGGCAATGGTCTTCGTGGCCATCTTCATCATCGCCATCTAC CGCTTCTTCGGTGTGCTGGCGACCGTAGCTCTGGCGTTCAACCTGGTGCTGCTGGTGGGCTTGATGTCGGCCATCGGTGC CACCCTGACCTTGCCGGGTATCGCCGGTATCGTCCTGACGCTGGGTATGGCGGTGGATGCCAACGTGCTGATCTTCTCGC GGATACGCGAGGAGCTGGCCAACGGGCTACCGGTGCAGCGCGCGATTCATGAAGGCTTCGATCGTGCCTACTCGGCGATT CTCGACAGTAACCTGACCACCTTGCTGGTCGGCGGCATCCTGTTTGCCATGGGTACCGGGCCGGTCAAGGGCTTCGCCGT GACCATGTCGCTGGGGATCGTGACTTCGATGTTCACAGCCATCATGTTCACCCGAGGTCTGGTCAACCTGATCTTCGGTG GCCGCAACGTCAAGAAGCTGTGGATCTGA Protein sequence : MLNKYPLWKYLLILSVLAIGLVYSIPNLYPDDPAVQISGASSALSIQQADVDRASKALTDAGIAVKAASIDERGRGGLIR LIKQDDQLPAKDIVRRALGDDYVVALNLAQTTPDWLRSLGASPMKLGLDLSGGVHFLLEVDMDKALDVRRKVYEGEIKSL LRKERVRYRSMPESNGRIQLGFADSDSLDKAQRLIRKDYSDFELTTVERNGQQILQLGLTQAKIAEIREYSIRQNLTTVR NRVNELGVAEPLVQRQGASRIVVELPGVQDTAEAKRILGKTANLEFRLQADFDAPRGATEAFGFREEGRPPVQLERELII TGDQVTDAQASFDENGRPQVNIRLDGHGGDLMNRATRNNVGRSMAVIFIEQKPVTRYVRQNVDGVEQEVAVSSFVEEKKI ISLATIQSALGSQFRITGLNGQGESSELALLLRAGGLAAPMYFAEERTIGPSLGAENIAKGIASTEWAMVFVAIFIIAIY RFFGVLATVALAFNLVLLVGLMSAIGATLTLPGIAGIVLTLGMAVDANVLIFSRIREELANGLPVQRAIHEGFDRAYSAI LDSNLTTLLVGGILFAMGTGPVKGFAVTMSLGIVTSMFTAIMFTRGLVNLIFGGRNVKKLWI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 78 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 78 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 78 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 78 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 78 |
